Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3379 ATGGCTTTGGCCTCTGCTTTTCTCAGGCCTTTCGTTACTCCAGTCGCTATTGATCTCCACGCGAAGACTACAACTGCTGGCTATGCGTGGGAGAGATTGGGATTTAACAAGTCGCCCAGTTCGAAGTCAAACCGACTGAAGGTGTTCACACTGAATTGTTCAATAGATAGGGATACAAATGTGAGCACATCGATTTTGGCGGACAGTATTACAGAGTGCCCAAGTGAAGAACGGACCAGCGAGCCTTCCCTTTCTACAGTTTTACTGAATTTCGATAATGAGTTTGATCCTTATGGAGCAATGAGTACGCCAATTTACCAAACTGCTACTTTTAAGCAGCCTTCTGCAACAAAAAATGGCCCTTATGACTATACTAGAAGTGGAAATCCTACCCGAGATGTTTTGGAAAGGTTACTCGCGAAGCTTGACAAAGCAGATAGAGCCTTTTGCTTCAGCAGTGGAATGGCTGCTCTGAATGCTGTTAGTCAGCTCGTTGGAACTGGTGAAGAAATTGTTGCTGGAGATGATCTCTATGGTGGTTCAGATAGACTATTGTCCCAAATAATTCCAAAGTCTGAAGTCATAGTGAAACAAGTAAATGCAAGTAATCTAGAGGAGGTGGCCTCTGCTATTGGACCTTGGACTAAGTTGGTGTGGGTAGAGAATCCCACCAATCCTCAGATACAAATACCTGATATTCGAAAAATGGCAGAGATGGCTCATGCACATGGTGCTCTTCTATTGGTAGACAATACCATGATGTCTCCTGTCTTGTGTCAGCCATTGGAACTTGGAGCAGATATTGTCATGCATTCAGCTACCAAATTTATTGGCGGACATAGTGCTATCATTGCTGGCGTCCTTGCCGTGAAATGTGAAAGGTTGGCAAAAGAGTTGTATTTATTACAAAATGCAGCGGGTTCAGGCTTAGCTCCATTTGACTGTTGGCTCTGTCTGCAAGAGATCAAAACAATGGAACTGCGAGTTGAGAAGCAACAGGAGAGTGCGCAAAAGATTGCTGAGTTTCTGGCCTCCCATCCTCGAGTTAAGAAAGTAAACTATGCTGGTCTTCCTAGTCATCCTGGACATCACCTGCACTACTCTCAGGCAAAGGGCGCAGGATCTGTGCTTAGCTTTTTGACAGGCTCAGTGGCATTCTCAAAGCATGTAGTTGAAAATGCCAAATACTTTAGCGTAGCTGTCAGTTTTGGGAGTGTAAAGTCCCTCATAAGCATGCCCTGCTTTATGACCCATGCCGGCATACCTGCCGCAGTCCGTGAGGCCAGAGGTTTAACTGAAGATCTTGTGCGTATTTCTGTAGGAATTGAGGATGTTAATGATCTTATTGCTAGTCTAGACAAGGCACTCTCATCTGGGCCTCTCTAA 1386 0.4488 MALASAFLRPFVTPVAIDLHAKTTTAGYAWERLGFNKSPSSKSNRLKVFTLNCSIDRDTNVSTSILADSITECPSEERTSEPSLSTVLLNFDNEFDPYGAMSTPIYQTATFKQPSATKNGPYDYTRSGNPTRDVLERLLAKLDKADRAFCFSSGMAALNAVSQLVGTGEEIVAGDDLYGGSDRLLSQIIPKSEVIVKQVNASNLEEVASAIGPWTKLVWVENPTNPQIQIPDIRKMAEMAHAHGALLLVDNTMMSPVLCQPLELGADIVMHSATKFIGGHSAIIAGVLAVKCERLAKELYLLQNAAGSGLAPFDCWLCLQEIKTMELRVEKQQESAQKIAEFLASHPRVKKVNYAGLPSHPGHHLHYSQAKGAGSVLSFLTGSVAFSKHVVENAKYFSVAVSFGSVKSLISMPCFMTHAGIPAAVREARGLTEDLVRISVGIEDVNDLIASLDKALSSGPL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3379 461 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 84 457 IPR000277 GO:0019346|GO:0030170
Prci1g3379 461 NCBIfam cystathionine beta-lyase 84 458 IPR006238 GO:0004121|GO:0071266
Prci1g3379 461 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 267 281 IPR000277 GO:0019346|GO:0030170
Prci1g3379 461 Gene3D - 83 324 IPR015421 GO:0003824
Prci1g3379 461 FunFam Cystathionine gamma-synthase homolog 82 324 - -
Prci1g3379 461 Pfam Cys/Met metabolism PLP-dependent enzyme 86 456 IPR000277 GO:0019346|GO:0030170
Prci1g3379 461 PIRSF CGS 72 459 IPR000277 GO:0019346|GO:0030170
Prci1g3379 461 SUPERFAMILY PLP-dependent transferases 89 457 IPR015424 -
Prci1g3379 461 FunFam Cystathionine beta-lyase 325 458 - -
Prci1g3379 461 CDD CGS_like 99 457 IPR000277 GO:0019346|GO:0030170
Prci1g3379 461 Gene3D Aspartate Aminotransferase, domain 1 325 458 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3379 Prci-Chr1 51209709 51218287 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3379 K01760 - qsa:O6P43_034482 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3379 1 51209709 51218287 Prci1g3379 1 51209709 51218287 ECH