Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3370 ATGGCTCTAATGGCTACTAGAACGAAGCTTGCGAGAGTTCTCACTGCTCTCTCTGCTCGAATGCCAAATTCGAGATCAGGGTCTAGCTGCTCCAACCCATTTGACGCGCTCCATAAGTTCTCTTCCTCTTACTCTTCCGTCGCTCTGGCTACCGAGGAATCAGAGACGATGAGTTCGCGATACATGGGGTTGGAGACGCTGGGAATCAAAGATTACGAGGATTACAGGAAATCCCGTTACGGTGACATCACTCACAAGGCTGTTCTTGTTGATGCCGTTGGCACTCTTGTTGTGCCCTCTCAACCCATGGCCGAGATATATAGAAAAATTGGGGAGAAGTATGGGGTAGAATACCCAGAGGACGAGATTTTACACAGATACAGAAGAGCTTACGGGCAGCCTTGGGGTAAATCTCGGCTCAGATATGTTAATGATGGCAGGCCCTTCTGGCAATACATAGTTAGTTATTCCACTGGCTGTTCAGATAATCAGTACTTTGAAGAACTTTATAACTACTATACGACAGATAAGGCATGGCACCTCTGTGATCCTGAAGCTGAGAAAGTGTTCAAAGCAATTAGAAAATCAGGTGTAAAGCTGGCTGTTGTGTAATTTGACACTCGATTAAGACCCCTACTGAAGGCATTGAACTGTGATAACTGGTTTGATGCAGTAGCAGTATCAGCTGAGGTTGAGGCTGAGAAGCCAAATCCAACGATATTTCTTAAAGCATGTGAGTTGTTAGGTGTAAAACCTGAGGACGCTGTTCATGTTGGGGATGATCGTAGAAATGATATATGGGGTGCTAGAGATGCAGGCTGTGATGCCTGGCTTTGGGGAAGTGATGTTCATTCCTTTAGGGAGGTAGCTCAGAGAATTGGGGTCGAAGTCCGATAG 897 0.4604 MALMATRTKLARVLTALSARMPNSRSGSSCSNPFDALHKFSSSYSSVALATEESETMSSRYMGLETLGIKDYEDYRKSRYGDITHKAVLVDAVGTLVVPSQPMAEIYRKIGEKYGVEYPEDEILHRYRRAYGQPWGKSRLRYVNDGRPFWQYIVSYSTGCSDNQYFEELYNYYTTDKAWHLCDPEAEKVFKAIRKSGVKLAVVSXFDTRLRPLLKALNCDNWFDAVAVSAEVEAEKPNPTIFLKACELLGVKPEDAVHVGDDRRNDIWGARDAGCDAWLWGSDVHSFREVAQRIGVEVR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3370 299 Gene3D - 101 174 IPR044924 -
Prci1g3370 299 NCBIfam HAD hydrolase, REG-2-like, family IA 86 279 IPR011949 -
Prci1g3370 299 SFLD Haloacid Dehalogenase 86 280 - -
Prci1g3370 299 CDD HAD_dREG-2_like 186 296 - -
Prci1g3370 299 Gene3D - 88 281 IPR023214 -
Prci1g3370 299 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 86 280 - -
Prci1g3370 299 SUPERFAMILY HAD-like 86 288 IPR036412 -
Prci1g3370 299 Pfam Haloacid dehalogenase-like hydrolase 94 277 IPR041492 -
Prci1g3370 299 NCBIfam HAD-IA family hydrolase 194 274 IPR006439 -
Prci1g3370 299 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 241 261 IPR006439 -
Prci1g3370 299 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 85 96 IPR006439 -
Prci1g3370 299 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 193 206 IPR006439 -
Prci1g3370 299 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 223 239 IPR006439 -
Prci1g3370 299 PANTHER - 32 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3370 Prci-Chr1 51127753 51132195 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3370 - - pcin:129290634 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3370 1 51127753 51132195 Prci1g3370 1 51127753 51132195 ECH