Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3338 ATGGATATAAGTAACGAGGCCAACGTCAGCCCCTTTTCAATTGGACCTTCAAGTTTTGTTGGAAAAACAATTGCTTTTAGGATTCTTTTCTGCAAGTCTACCTCACATTTGAGGCAGCAGATCTTTCGGCTAGTGCTGGGTCTCTTCTATAGATTCAGAGCGTGTATAAAACCCATTATATCATGGTTGCATCCAAGAAACCCTCAGGGGATATTGGCAATGATGACAATAGTTGCTTTCTCATTGAATCGGTACACAAATGTGAAAGCAAGGGCTGAGATGGCATATAGGAGGAAGTTTTGGAGAAACATGATGAGATCTGCATTGACATATGAGGAGTGGGCTCATGCAGCTAAGATGCTTGATAGAGAAACGCCAAAAATGAATGAATCAGACCTTTATGATGTAGAATTGGTGAGAAACAAACTTCAAGAGCTCCGTCACCGTCGTCGAGAGGGATCTCTTAGAGACATTATATTTTGTATGCGTGCTGATCTTGTTAGAAATCTAGGCAATATGTGTAACTCTGAGCTTCATAAAGGGAGGCTTCAGGTGCCCAAATTAATCAACGAGTATATTGATGAAGTATCTACGCAGTTGAGGATGGTATGTGATTCTGATTCAGAGGAGCTGTCATTGGAAGAGAAGCTAGCTCTCATGCATGAAACCAGACATGCGTTTGGGAGGACTGCTTTGCTGTTAAGTGGGGGTGCTTCTTTAGGAGCTTTTCATGTTGGTGTAGTGAAAACACTGGTGGAACATAAACTCTTGCCTAGAATCATTGCAGGTTCAAGTGTAGGTTCCATTATGTGTTCTATTGTTGCTACTCGGTCTTGGCCAGAGCTTCAAAGCTTTTTTAAGGATTCATGGCATTCATTGCAGTTTTTTGACGAAATGGGTGGAATTTTTGCTGTTGTTAAGAGGGTTATGACATATCGTGCTGTCCATGAGATCAGACAGTTGCAAATAATGTTGAGGCATTTGACAAGCAACCTTACATTTCAAGAAGCTTATGACATGACAGGTCGAATTCTTGGGATAACTGTTTGCTCTCCAAGAAAGCATGAACCTCCTAGGTGTCTCAACTATTTAACTTCACCTCATGTTGTTATATGGAGTGCAGTCACTGCTTCTTGTGCCTTTCCTGGCCTTTTCGAGGCTCAGGAATTGATGGCTAAGGATAGAAGCGGAGAGATTGTTCCTTACCACCCCCCATTTAATTTGGGCCCTGAGGAGGGATCCTCACCAGCACGTCGATGGAGAGACGGTAGTTTGGAGATTGATTTACCTATGATGCAGTTGAAAGAGCTGTTCAATGTCAATCATTTTATTGTCAGTCAGGCCAACCCTCATATTGCTCCATTGTTGAGATTGAAAGAATTTGTAAGAGCTTATGGAGGCAATTTTGCTGCCAAGCTTGCTCATCTTACGGAGATGGAGGTGAAGCATAGATGTAATCAAGTACTGGAATTTGGTTTTCCATTAGGTGGACTTGCCAAGTTGTTTGCTCAAGACTGGGAGGGTGATGTAACTGTTGTTATTCCTGCTACTCTTGCTCAGTACTTGAAAATTATCCAGAACCCATCCCACGTTGAGCTTCAAAAGGCAGCCAACCAGGGGAGAAGGAGCACTTGGGAGAAGCTTTCAGCCATAAAGGCAAACTGTGCAATTGAGATTGCTCTTGATGAATGTGTTGCCATGCTCAACCACATGAGAAGACTCAAGAGAACATCCGAGAGAGCATCTGCTACTTCTTCTCATGGTCTGGCCAATACTGTCAAATTCAGTGCTTCAAGAAGAATCCCTTCATGGAATTGCATGGCACGAGAGAATTCTGCAAGTTCCCTTGAAGATTTTTCTACAGATCCCTCATTGCATCAAGGCTCTACTAAGAACTGGATGACCCACCGTAGCATCCATGATCATGGAAGTGACAGTGAATCTGAAAATGTTGATCAGAACTCTTGGACACGTTCTGGTGGGCCTTTGATGAGAACTGCTTCGGCAAATAAGTTTGTAGACTTCGTTCAGAGCCTAGATTTCGATGCTGAGCTAAATAGAGGTGTTGTGGCTCACTCCAATCGGCAAGTGGTTCAGTCCAATCAGAGCTCGAGGGTCTCAACACCTGACAGCATAATGGTGAATGAAGGTGATCTTTTGCAGCCTGAGAGGATCCATAATGGGATTGTGTTTAATGTTGTCAAGAAAGAAGACTTTACGCAACCTAGGACCCATGACCTTGAGCATCACAGCCACGAGGTTGCTGAATGTGTTGTTCAAAGTGACAGTCCAGGGAAGGAGATGGATGCTAGCTCTGCTTCTGATTGTGGAGATAATGATTCTACAACAGCCGATTCCTTAATAACTGATCATTGTTCCGCTGATGTGGGTAAGGATCAGAGCTGTTGA 2409 0.4334 MDISNEANVSPFSIGPSSFVGKTIAFRILFCKSTSHLRQQIFRLVLGLFYRFRACIKPIISWLHPRNPQGILAMMTIVAFSLNRYTNVKARAEMAYRRKFWRNMMRSALTYEEWAHAAKMLDRETPKMNESDLYDVELVRNKLQELRHRRREGSLRDIIFCMRADLVRNLGNMCNSELHKGRLQVPKLINEYIDEVSTQLRMVCDSDSEELSLEEKLALMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVEHKLLPRIIAGSSVGSIMCSIVATRSWPELQSFFKDSWHSLQFFDEMGGIFAVVKRVMTYRAVHEIRQLQIMLRHLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEEGSSPARRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFVRAYGGNFAAKLAHLTEMEVKHRCNQVLEFGFPLGGLAKLFAQDWEGDVTVVIPATLAQYLKIIQNPSHVELQKAANQGRRSTWEKLSAIKANCAIEIALDECVAMLNHMRRLKRTSERASATSSHGLANTVKFSASRRIPSWNCMARENSASSLEDFSTDPSLHQGSTKNWMTHRSIHDHGSDSESENVDQNSWTRSGGPLMRTASANKFVDFVQSLDFDAELNRGVVAHSNRQVVQSNQSSRVSTPDSIMVNEGDLLQPERIHNGIVFNVVKKEDFTQPRTHDLEHHSHEVAECVVQSDSPGKEMDASSASDCGDNDSTTADSLITDHCSADVGKDQSC 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3338 802 SUPERFAMILY FabD/lysophospholipase-like 228 574 IPR016035 -
Prci1g3338 802 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 232 435 IPR002641 GO:0006629
Prci1g3338 802 Gene3D Cytosolic phospholipase A2 catalytic domain 220 443 - -
Prci1g3338 802 CDD Pat_SDP1-like 162 569 - -
Prci1g3338 802 MobiDBLite consensus disorder prediction 758 786 - -
Prci1g3338 802 Pfam Patatin-like phospholipase 232 423 IPR002641 GO:0006629
Prci1g3338 802 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 40 570 - -
Prci1g3338 802 Pfam Domain of unknown function (DUF3336) 94 225 IPR021771 GO:0004806|GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3338 Prci-Chr1 50893682 50898436 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3338 1 774 Acyl Lipid Metabolism Gene Families AT5G04040 74.750 0.0 1229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3338 K14674 - fve:101298727 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3338 1 50893682 50898436 Prci1g3338 1 50893682 50898436 ECH