Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3323 ATGTCATTCTTGACTCGTCTCAACACTTTGGCAAGACCTCTCTGTTCCTCTCTCTTCTGCATCTCACGCCAGGCGATGGGGATTCAGAATTATTGCATTGGAGGTAGAGATGCAATAACTAGGATGGGCATGAAAACCTGCTCTCTTCCTTCTGTAGTTGAAGAAGCTTCAGATTTAGAATGTGACCAGATCCATGAGGATGTCAAGGCGACAGAGAAAGATTCTGCACTACGCTTGGCTGTTTCACAACTTGCTAATGAGTTTACCAGAGAGTCAATGTTATCTTTGCAAAAGTTTTTTTGTACGCGTCGTGCACCTGTTATTTCTACAGGCTCCCTGAAGCTGGACCTAGCTCTGGGAGTTGGAGGGTTACCAAAGGGTAGAATTGTGGAAATTTATGGGCGAGAAGCAGCTGGCAAGACAACACTTGCACTTCAAGTTATAAAAGAAGCTCAAAAGCTTGGAGGATATTGTGCTTATCTTGACGTAGAAAATGCATTGGACTTTTCACTTGTAGAATCAATTGGTGTAAATACCGAAAACATTCTTGTCTCACATCCTGATTGTGCTGAAAACTTGTTGAGCATGGTGGATACATTAACGAAAAGTGGAGCTGTGGATGTGATTGTGATTGACAGTGTTGCTGCCCTGGTCCCAAAACGTGAACTTGATCAATTAGGTATTGGCTGTGAACAAGATTCTCTGAAGAAATTACTGACTCAAGCACTACGGAAAATTCATTATTCACTATCTCACTCTCAAACTCTTATCATTTTCATTGATCAGGTTAGATTAAGACCAAAATCAGGCCAGGCGTGTGGACCTGTTGAAGAGGTTACTTGTGGTGGAAATGCCTTAGGATTCCATGCGGCTGTACGAATGAGACTTTCAAGAATGAGGTTGTTGAAAAGTGAGGACCAGGCAGAGGGCCTTGCAATCTGCGTGCAAGTTCTAAAAAATAAGCTGGCACCTGCAATGAAAAAGGTCGAATTGGGGATCAAGTTTGGAAGAGGCTTTTGCCTTGAAGCAGAGGTCTTAGAGTTGGCTTGTGAGTATGGAGCAATTATTAAACAAGGTGACAGCTACCTTATCGAAGGTTTGGCTTTTGATAGTAAACTTGCAGCTCAACGTTATTTGGCTGAAAATGATGAGATTCTTGATAAATTGGTCGTGGACCTGAGGAGAGCTTTGTTTTAA 1197 0.4236 MSFLTRLNTLARPLCSSLFCISRQAMGIQNYCIGGRDAITRMGMKTCSLPSVVEEASDLECDQIHEDVKATEKDSALRLAVSQLANEFTRESMLSLQKFFCTRRAPVISTGSLKLDLALGVGGLPKGRIVEIYGREAAGKTTLALQVIKEAQKLGGYCAYLDVENALDFSLVESIGVNTENILVSHPDCAENLLSMVDTLTKSGAVDVIVIDSVAALVPKRELDQLGIGCEQDSLKKLLTQALRKIHYSLSHSQTLIIFIDQVRLRPKSGQACGPVEEVTCGGNALGFHAAVRMRLSRMRLLKSEDQAEGLAICVQVLKNKLAPAMKKVELGIKFGRGFCLEAEVLELACEYGAIIKQGDSYLIEGLAFDSKLAAQRYLAENDEILDKLVVDLRRALF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3323 398 Gene3D - 103 394 IPR027417 -
Prci1g3323 398 PANTHER RECA 58 397 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci1g3323 398 Pfam recA bacterial DNA recombination protein 76 339 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci1g3323 398 SMART AAA_5 126 305 IPR003593 GO:0016887
Prci1g3323 398 CDD RecA 106 340 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci1g3323 398 PRINTS RecA protein signature 315 344 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci1g3323 398 PRINTS RecA protein signature 234 263 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci1g3323 398 PRINTS RecA protein signature 162 191 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci1g3323 398 PRINTS RecA protein signature 196 225 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci1g3323 398 PRINTS RecA protein signature 282 310 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci1g3323 398 PRINTS RecA protein signature 368 385 IPR013765 GO:0003697|GO:0005524|GO:0006281
Prci1g3323 398 ProSiteProfiles RecA family profile 1. 104 263 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Prci1g3323 398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 338 IPR027417 -
Prci1g3323 398 ProSiteProfiles RecA family profile 2. 270 344 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3323 Prci-Chr1 50801163 50807015 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3323 - - aip:107645515 528.094