Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3319 ATGGGGTCATTACCATCTGATTGTTTTGAACATGGCAAGTTCTTATTTGCCATAGTCTTCATAGTTGTAACCCTTAACTGTTTAACAACTAAAGCTAACCTATGCTGCAATAACTCTGTTGCTGCCCCAAGAATTCCTGCCTACGATATTCTTTCATCATTGCAAACACTAGCTCTTGATGGTTACTTCAGTTTGGAAGACAATGGACATAAAGACTTTGGTAACATATACCATTGTCCTCCTCTGGCAATTCTGCATCCAAAAACAGTTTCTGATATCTCACGCACAATAAAGCATATTTTTGAAATGGATTCTGCTTCACAGCTAAAGGTTGCAGCTAGAGGCCGCGGTCATTCTCTTCAAGGTCAGGCACAAGCATATCAAGGCCTAGTGGTGAACATGGAGTCACTGAAGGGATCAGAAATGGTTGTTCACGGTGGAGAATTTCCTTATGTGGATGTCTCAGCTAGTGAGTTATGGATAGTCATTCTCCATGAGACTCTTAAGCACGGTTTGGCACCTAAATCTTGGACAGACTATCTTCATCTTACAGTTGGAGGAACTCTATCAAATGCTGGAATAAGCGGACACGCCTTCAAGCATGGACCCCAGATCGATAACATTTTTCAGCTGGAAGTAATCACCGGAAAAGGAGAGGTGCTTACCTGCTCAGAGAACCAAAATGCTGACCTTTTTTATAGTGTTCTTGGAGGGCTTGGTCAATTTGGCATCATAACCAGGGCTAGAATTTCTCTTGAACCAGCACCAATAAAGGTGAAATGGATTAGAGTGTTATACTCAGAATTCTCAGTATTTACAAGGGATCAAGAGTACTTGATATCACTTGAAAATACATTTGATTATATTGAAGGCTTCGTAATTATAAACAGAACAGGCATCCTTAACAACTGGAGGTCATCCTTCAATCCCGAAGACCCAATTCAAGCCAGCCAATTCAATTCAGATGGGAGGACATTTTACTGTCTCGAGGTGGCAAAATACTTCAACCCAGGCGAAACTGAAGCCATGAATCAGGAAATCGACCAACTGTTATCAGAACTGAGCTATATTCCATCGACAATATTTCTATCAGAAGTTCCTTACGTAGATTTCCTGGACAGAGTGCATGTTTCCGAGATGAAGCTAAGAGCCAAAGGCTTGTGGGAAGTTCCCCATCCATGGCTCAATCTTCTGATCCCAAGGAGCAAAATTCATGAGTTCGCACATGAGGTGTTTGAGAAAATTCTTTCGGATACAAGCAATGGACCCATACTCATATACCCCGTCAATCAATCAAGGTGGAACAATAGAACATTTTTGGTTACACCAGAGGAAGATGTTTTCTATCTGGTGGCATTTCTTCCTTCTGCTGTACCATTTTCGACAGGGAAAGACAGCTTAGATTACATTCTAAGCCAAAACGAAAGGATCATAGAGTTCTGCAAGCGGGCTCAGCTAGGAGCGAAGCAATATCTTGCACATTACAGCACACGAGAAGAATGGGAAGGCCACTTTGGGACAAGATGGGAACTGTTGAGAAGAAGGAAATCCGAGTATGACCCATTGGCAATTCTTGCCCCTGGCCACAGAATCTTTCAAAACTCAAAAGCCGATACCAACCTCCTGTTGGCCATGTGA 1638 0.4231 MGSLPSDCFEHGKFLFAIVFIVVTLNCLTTKANLCCNNSVAAPRIPAYDILSSLQTLALDGYFSLEDNGHKDFGNIYHCPPLAILHPKTVSDISRTIKHIFEMDSASQLKVAARGRGHSLQGQAQAYQGLVVNMESLKGSEMVVHGGEFPYVDVSASELWIVILHETLKHGLAPKSWTDYLHLTVGGTLSNAGISGHAFKHGPQIDNIFQLEVITGKGEVLTCSENQNADLFYSVLGGLGQFGIITRARISLEPAPIKVKWIRVLYSEFSVFTRDQEYLISLENTFDYIEGFVIINRTGILNNWRSSFNPEDPIQASQFNSDGRTFYCLEVAKYFNPGETEAMNQEIDQLLSELSYIPSTIFLSEVPYVDFLDRVHVSEMKLRAKGLWEVPHPWLNLLIPRSKIHEFAHEVFEKILSDTSNGPILIYPVNQSRWNNRTFLVTPEEDVFYLVAFLPSAVPFSTGKDSLDYILSQNERIIEFCKRAQLGAKQYLAHYSTREEWEGHFGTRWELLRRRKSEYDPLAILAPGHRIFQNSKADTNLLLAM 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3319 545 Gene3D - 134 257 IPR016169 -
Prci1g3319 545 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 256 532 IPR015345 GO:0009690|GO:0019139|GO:0050660
Prci1g3319 545 Gene3D - 70 532 IPR016167 -
Prci1g3319 545 Gene3D - 258 491 IPR016170 -
Prci1g3319 545 ProSiteProfiles PCMH-type FAD-binding domain profile. 77 255 IPR016166 GO:0071949
Prci1g3319 545 SUPERFAMILY FAD-linked oxidases, C-terminal domain 259 532 IPR016164 GO:0003824|GO:0050660
Prci1g3319 545 PANTHER GULONOLACTONE OXIDASE 40 533 - -
Prci1g3319 545 SUPERFAMILY FAD-binding/transporter-associated domain-like 71 254 IPR036318 GO:0050660
Prci1g3319 545 FunFam Cytokinin dehydrogenase 2 258 491 - -
Prci1g3319 545 Pfam FAD binding domain 81 224 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3319 Prci-Chr1 50769712 50772041 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3319 K00279 - gmx:100777568 815.453