Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3272 ATGACGGTCACGCCTAGGATCTCCGTTAACGATGGGAACTTGGTTGTTCATGGGAAGACTATACTGACAGGAGTACCAGATAACATTATCCTCACCCCAGGATCTGGAGTGGGACTTGTTGCTGGTGCATTTCTTGGTGCCACAGCTTCCCACAGCAAAAGTCTCCATGTCTTCCCCATGGGTATTTTAGAGGGCCTTCGGTTCATGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACTCAGAGAATGGGAACCTGCGGGAGAGATATCCCTTTGGAGACCCAATTCATGCTTATAGAGAGCAAAAATGACGGAGGTGCTGATTTGGAGAATTCTCAAACCATCTACACTGTCTTGCTTCCTCTGCTGGAAGGCCCGTTCCGTGCTGTTCTACAAGGGAATGACAAAAACGAAATAGAGATTTGTCTTGAGAGTGGAGACAATGCTGTTGAGACGAATCAAGGTCTTCACTTGGTCTACATGCATGCTGGGACAAACCCTTTTGAAGTCATTAACCAAGCCGTCAAGGCTCTAGAAAAACACATGAAAACATTCCTTCATCGTGAGAAGAAGAGATTGCCATCTTTTCTTGACTGGTTTGGCTGGTGCACATGGGATGCTTTCTATACTGATGTCACGGCAGAGGGTGTTAAGGAAGGCCTCAAGAGCTTATCAGAGGGCGGCACACCTCCACGCTTCCTTATCATAGACGATGGTTGGCAACAAATTGAAAGTAAACCAAGGGATGCTGATTGTGTCGTACAAGAAGGAGCACAGTTTGCCAGTAGGTTAACTGGTATAAAAGAGAACACTAAATTTCAGAAGAATGGACAGAATAATGAACAGAGCTCAGGCCTGAAGCATGTGGTGGATGAAGCGAAGCAACATCACAATGTGAAATATGTATATGTATGGCATGCTCTAGTTGGTTATTGGGGTGGAGTGAAGCCAGCAGCCAGCGGCATGGAACATTATGACACTGCTTTAGCATACCCAGTACAGTCCCCTGGCGTACTAGGAAACCAGCCAGACATTGTCATCGACAGCTTGGCTGTACATGGCTTGGGTCTAGTGCATCCCAAGAATGTTTTCAACTTCTACAATGAGCTCCATGCTTACTTAGCTTCGTGTGGAGTAGATGGAGTAAAAGTTGATGTTCAGAACATTATTGAAACCCTTGGGTCTGGACATGGTGGCAGAGTCTCACTCACACGCAGCTATCATCAGGCCCTTGAGGCCTCCGTGTCTCGCAACTTTCCTGACAATGGATGTATCGCATGTATGTGTCATAACACCGATGGGCTCTATAGCGCTAAGCAGACTGCTGTTGTGAGAGCGTCTGACGACTTTTACCCACGCGATCCTGCTTCCCACACAATCCATATATCATCCGTAGCATACAACACGCTATTCCTTGGAGAATTCATGCAGCCTGACTGGGATATGTTCCAGAGTTTACACCCAGCGGCAGAGTACCATGCTGCAGCTCGTGCAGTTGGTGGAGGCGCAATTTATGTTAGTGACAAGCCAGGCAACCACAATTTTGAGCTTCTCAAGAAGCTGGTTCTACCTGATGGATCAATTCTCCGTGCTCAACTACCAGGAAGGCCCACTCGCGATTCTCTCTTCACTGATCCAGCTAGGGACGGGACTAGCTTGCTCAAAATATGGAACTTAAACAAATGCTCTGGAGTGGTTGGGGTATTCAACTGTCAAGGTGCTGGGTGGTGCAAGATAGAGAAGAAGACCCGGATCCACAATGCATCTCCAGGCACACTCACTTGCTCTGTTCGTGCCTCCGATGTTGACCTCATCACTCAAGTGGCTGGTGTTGATTGGGATGGCGACGCCATTGTTTATTCGTACAAATCAGGTGAGGTGATTAGGCTGCCTAAAGATGCCTCGGTGCCAGTGACGCTGCAAGTTTTGGATTACGAACTTTTCCATTTCTGTCCAGTGAAGAAAATTCCTCCAAGTATATCGTTTGCAGCAATAGGGCTACTGGGCATGTTCAACACCGGAGGAGCCGTAGAGCAGGTTGAAATCCACAAAGCAAGTGACAAAGAAGAACTATTCGATGGCGAGGTTGAATCTGAGCTGACCACTTCTCTCAGTTCAAGCCGATCAGCAACGGCAAATATTACCCTCCGAGTGAGAGGAAGTGGCAGATTTGGAGTGTACTCCTCCCAGCGCCCCTTGAAGTGTGTAGTGGGTGAGGTTGAAACCGATTTCGAGTATGACTCGGCCACCGGTTTGGCTACCTTCAGTATTCCTCTTATTTCAAAGGAATTGCACAGATGGCCCATAGAAATTCAAATTTGA 2322 0.4746 MTVTPRISVNDGNLVVHGKTILTGVPDNIILTPGSGVGLVAGAFLGATASHSKSLHVFPMGILEGLRFMCCFRFKLWWMTQRMGTCGRDIPLETQFMLIESKNDGGADLENSQTIYTVLLPLLEGPFRAVLQGNDKNEIEICLESGDNAVETNQGLHLVYMHAGTNPFEVINQAVKALEKHMKTFLHREKKRLPSFLDWFGWCTWDAFYTDVTAEGVKEGLKSLSEGGTPPRFLIIDDGWQQIESKPRDADCVVQEGAQFASRLTGIKENTKFQKNGQNNEQSSGLKHVVDEAKQHHNVKYVYVWHALVGYWGGVKPAASGMEHYDTALAYPVQSPGVLGNQPDIVIDSLAVHGLGLVHPKNVFNFYNELHAYLASCGVDGVKVDVQNIIETLGSGHGGRVSLTRSYHQALEASVSRNFPDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFQSLHPAAEYHAAARAVGGGAIYVSDKPGNHNFELLKKLVLPDGSILRAQLPGRPTRDSLFTDPARDGTSLLKIWNLNKCSGVVGVFNCQGAGWCKIEKKTRIHNASPGTLTCSVRASDVDLITQVAGVDWDGDAIVYSYKSGEVIRLPKDASVPVTLQVLDYELFHFCPVKKIPPSISFAAIGLLGMFNTGGAVEQVEIHKASDKEELFDGEVESELTTSLSSSRSATANITLRVRGSGRFGVYSSQRPLKCVVGEVETDFEYDSATGLATFSIPLISKELHRWPIEIQI 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3272 773 Pfam Raffinose synthase or seed imbibition protein Sip1 7 756 IPR008811 -
Prci1g3272 773 PANTHER - 1 770 IPR008811 -
Prci1g3272 773 Gene3D Aldolase class I 198 520 IPR013785 -
Prci1g3272 773 SUPERFAMILY (Trans)glycosidases 196 521 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3272 Prci-Chr1 50325680 50332236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3272 1 557 Glycoside Hydrolase AT3G57520 81.329 0.0 974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3272 K06617 - jre:109022202 1344.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3272 1 50325680 50332236 Prci1g3272 1 50325680 50332236 ECH