Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3248 ATGAGCCTCTCGTTCCTCGCTCTCGATCCCTTAACTGTCTCCACCTCTCGCAGGGTCAGCGAAATCCACCGCAGGCCTCCTACTCCTCGCCGGAGCATCGTCCTTTGCTCTGCGAAGCCCTTGGTGTCCGTTTCTTCCAACCCCAGCTCGTCTGATTCCTCTACCACCATTGATAGGCTGAGTCGAATCGGGTCCCTCAGTGAGGTGTCCGGTGTTTTGGGTTGCCAGTGGGGCGATGAAGGTAAAGGTAAGCTCGTGGATATCCTAGCCCACCACTTCGATGTCGTTGCCCGTTGTCAGGGTGGAGCTAATGCTGGGCATACCATTTATAATGCTGATGGAAAAAAATTTGCTCTTCATCTTGTTCCTTCTGGTATACTTAATGAGGATACGTTGTGTGTTATTGGGAATGGGGTTGTAGTGCATCTGCCACAGTTTTTTAAAGAAATTGACAGCTTAGAATCCAATGGGGTCTCTTGCAAGGGAAGGATACTGATATCTGATCGCGCTCACTTGTTGTTTGATTTTCACCAAGTAGTTGATGGACTAAGAGAGGCTGAGCTTGCTAAATCTTTTATTGGAACTACCAAAAGAGGCATTGGACCCTGCTATTCTAGCAAGGTTATCCGAAATGGCATTAGAGTAAGTGATTTGAAGTATATGGATACTTTTCCTCAGAAGCTCGATCTTTTGTTATCAGATGCGGCATTGAGATTCAAAGATTTTAATTATAGTCAGGACATGCTCAGGGAAGAAGTTGAAAGGTACAAGAGATATGCTGAGAGATTGGAACCTTTCATTGCTGATACTGTACATTTCATGAATGAAGCTGTAGCACAAAAGAAGAAGATTCTTGTTGAAGGAGGCCAAGCAACAATGTTGGACATTGATTTTGGAACTTATCCCTTTGTAACTTCATCCAGTCCATCCGCAGGTGGGATTTGTACTGGTTTAGGCATTGCTCCAAGAGTTATTGGTGATCTAATTGGTGTGGTTAAATCATACACTACAAGGGTTGGTGCTGGTCCTTTTCCCACTGAAATCTTGGGTCAGGAGGGTGATCTCCTTAGGTTTGCTGGGCAGGAGTTTGGCACAACTACTGGTCGTCCCAGACGCTGTGGTTGGCTTGATATAGTTGCATTAAGATATTGCTGTCAGATCAATGGGTTTTCATCACTCAATCTCACCAAGCTGGATGTTTTGTCAGATTTTTCTGAATTTAAATTGGGCGTGTCTTATAAACACATAGATGGTACACCAATCAAATCATTCCCTTCAGATCTCCGTCTTCAAGATCAGTTGAAGGTGGAGTATGAGGTACTTCCGGGATGGAATTGTGATATTTCTTCCTTAAGAAACTATTCTGAACTTCCAAGAGCTGCACGCCATTACGTGGAAAGAGTAGAAGAACTTGTTGGTGTGCCAATTCACTACATTGGTGTTGGACCTGGGCGTGATGCTCTAATTTATAAATAA 1476 0.4417 MSLSFLALDPLTVSTSRRVSEIHRRPPTPRRSIVLCSAKPLVSVSSNPSSSDSSTTIDRLSRIGSLSEVSGVLGCQWGDEGKGKLVDILAHHFDVVARCQGGANAGHTIYNADGKKFALHLVPSGILNEDTLCVIGNGVVVHLPQFFKEIDSLESNGVSCKGRILISDRAHLLFDFHQVVDGLREAELAKSFIGTTKRGIGPCYSSKVIRNGIRVSDLKYMDTFPQKLDLLLSDAALRFKDFNYSQDMLREEVERYKRYAERLEPFIADTVHFMNEAVAQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVIGDLIGVVKSYTTRVGAGPFPTEILGQEGDLLRFAGQEFGTTTGRPRRCGWLDIVALRYCCQINGFSSLNLTKLDVLSDFSEFKLGVSYKHIDGTPIKSFPSDLRLQDQLKVEYEVLPGWNCDISSLRNYSELPRAARHYVERVEELVGVPIHYIGVGPGRDALIYK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3248 491 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 76 83 IPR018220 GO:0005525
Prci1g3248 491 NCBIfam adenylosuccinate synthase 72 489 IPR001114 GO:0000166|GO:0004019|GO:0006164
Prci1g3248 491 FunFam Adenylosuccinate synthetase 332 491 - -
Prci1g3248 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 490 IPR027417 -
Prci1g3248 491 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 332 491 IPR042111 -
Prci1g3248 491 SMART adenylsucc_synt 69 490 IPR001114 GO:0000166|GO:0004019|GO:0006164
Prci1g3248 491 CDD AdSS 69 490 IPR001114 GO:0000166|GO:0004019|GO:0006164
Prci1g3248 491 FunFam Adenylosuccinate synthetase, chloroplastic 168 266 - -
Prci1g3248 491 PANTHER ADENYLOSUCCINATE SYNTHETASE 54 491 IPR001114 GO:0000166|GO:0004019|GO:0006164
Prci1g3248 491 Hamap Adenylosuccinate synthetase [purA]. 1 491 IPR001114 GO:0000166|GO:0004019|GO:0006164
Prci1g3248 491 Pfam Adenylosuccinate synthetase 72 489 IPR001114 GO:0000166|GO:0004019|GO:0006164
Prci1g3248 491 ProSitePatterns Adenylosuccinate synthetase active site. 199 210 IPR033128 -
Prci1g3248 491 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 168 266 IPR042110 -
Prci1g3248 491 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 72 331 IPR042109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3248 Prci-Chr1 50186256 50191835 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3248 K01939 - gmx:100792329 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3248 1 50186256 50191835 Prci1g3248 1 50186256 50191835 ECH