Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3216 ATGACCGACGCAATCGAGCCCTCTACATCTTCTTCATTGTCGTCTTCGGCGAGAGACCCAAGCGCTGTTATTCATCCCAGGCGCGAGCCCTTCGAGCATGGCCTCCTGCCCATCCCCAAGCTCATCTTCTCTGACCCGACGCAAACCCTAATTTCCCTGAAGCAGAAGCTTCTTTCGCTGTCCCCTAATCAACGGGCCAACTCTGCGGCCATCTCGGACGCTCTGCAGATCTCCATTGACTGCGCTAGGCTCGTTCTCGATACCCTCGCCTCGGTATTACACTCGGAATCCGAACCTTTAGTTAGAGCCAAGCCGGAAGAAATCGAATCCGTTGGTGCCGATGTCCATGATCTGGTTTTGTTCTTGTACATTCAATCCTACAAGAAGCTGCTTCCCAGAACGCACAAGGACTCTGCGTCCGTGGCCGATGTTTGGCCTTCCACCTCGGCTTTTGATGGCTACTTGTCTGCTCTCTCGCCGTTGCAGCTAGTGCGTAGCAACAGTCGTCGATTTATGCCATCACAAGCTGATGAGGAGGCGCATCAGTTATCATATTTGCAGAAGCACCTGGCTAACATTCTGTCTCTTTTAGCTGAGCCTGTGGAGGGGGAAGGGGAAGAAGCTCTGGTTTTAACTATGGATAGATTGGAGCACCTTGGGTTTCTAATTCAGTTCGGTGATAAGGGATCCGAAGGAAGCACTTTGAGCCAATCGTCTCCCTTTTTTGCAAACTCAGATCCTGACATGCCAGCTGTTCCTGTTCCTGCTGCACAAATTCATGATTGGCTTCTGCAAAATATTGCTTCTTCTTTGGAAAATATTTCTGAAAGGGCTTTGCTAAAGGAAAATGGACCTGCCAGTGTATGTGACCAGGATGTTAATATGGTTGATGCATGTACTGTCCCAGCTAAGGCCCCACCATGTACTAGAGGTCCATGTTTCATTGAAGGGATCTCTAAATCATCATTCTCTAAGAATGCATCTGACATTAAAGGTTCATCTGTCAAGGTTCTAAATTGCCATGAGTCTGCCATTTACATTTTAGCACCTGTGAGATATGCCACTGTCTATGGTTGCTCGGATGCTACTGTTGTTCTTGGAGCAGTTGGCAAGGCTGTTAGAGTAGAACACTGTGAACGAGTTCATGTGATTGTAGCAGCTAAACGTATATGTATTGCAAATTGTCGTGAATGTGTTTTCTTTTTGGGAGTGAACCAGCAACCTCTTATTGTTGGTGATAACCATAAGCTGCAGGTGGCACCCTACAATACATTTTATTCCCAGTTAGAGGAGCACATGGCTGAAGCTGGAATTCTGCCTACGGTAAACAGGTGGGATGAACCTGTGGCATTGGGCGCAGTTGATCTTCATGATTCATTATCTCATCCAGCTGGTGTCTCTGATGTTCAAGCTGAGTCAGCTACTCGAGTAGATCCTGATCAGTTCACTGATTTTGTGATTCCGAGCTGGCTTGGAGGAGAGTTGACTGGGTCTACAAAACACAACCCATTCACATTACCAGATGCTTATATGGCTTCGCAGCTTAGAAATCAAAAGAATTTAGCGGGGATAAGGCAACTCTTGCGGGAAGCACCCCTTGAAGAAAATCGTAAAAGAGAATTATCATCCGCACTCCATGTTTGCTTCAAGGACTGGTTATATGCATCTGGAAACATTCGGCAACTCTACTGTCTGCAAGGCGAATGA 1707 0.4704 MTDAIEPSTSSSLSSSARDPSAVIHPRREPFEHGLLPIPKLIFSDPTQTLISLKQKLLSLSPNQRANSAAISDALQISIDCARLVLDTLASVLHSESEPLVRAKPEEIESVGADVHDLVLFLYIQSYKKLLPRTHKDSASVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHLANILSLLAEPVEGEGEEALVLTMDRLEHLGFLIQFGDKGSEGSTLSQSSPFFANSDPDMPAVPVPAAQIHDWLLQNIASSLENISERALLKENGPASVCDQDVNMVDACTVPAKAPPCTRGPCFIEGISKSSFSKNASDIKGSSVKVLNCHESAIYILAPVRYATVYGCSDATVVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLIVGDNHKLQVAPYNTFYSQLEEHMAEAGILPTVNRWDEPVALGAVDLHDSLSHPAGVSDVQAESATRVDPDQFTDFVIPSWLGGELTGSTKHNPFTLPDAYMASQLRNQKNLAGIRQLLREAPLEENRKRELSSALHVCFKDWLYASGNIRQLYCLQGE 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3216 568 ProSiteProfiles C-CAP/cofactor C-like domain profile. 306 438 IPR017901 -
Prci1g3216 568 MobiDBLite consensus disorder prediction 1 22 - -
Prci1g3216 568 Pfam Tubulin binding cofactor C 332 447 IPR012945 -
Prci1g3216 568 PANTHER UNCHARACTERIZED 21 566 IPR039589 -
Prci1g3216 568 SMART carp 378 412 IPR006599 -
Prci1g3216 568 SMART carp 340 377 IPR006599 -
Prci1g3216 568 Gene3D - 313 459 IPR016098 -
Prci1g3216 568 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 332 404 IPR036223 -
Prci1g3216 568 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3216 Prci-Chr1 49943875 49951333 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3216 K16810 - gmx:100800780 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3216 1 49943875 49951333 Prci1g3216 1 49943875 49951333 ECH