Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3185 ATGGGAGCAGGTGGCCGATCCTCCGTTCCTCCTGCCCTGAGGAAGTCAAAGACTGAGACGGTGAAGAGAAGCCCAGTGGAGCAGCCGCCGTTCACGCTGGGCCAGGTCAAGAAAGCTGTGCCGCCTCACTGTTTCAACCGTTCTGTGGTGCGCTCTTTCTCCTACGTCCTTTACGACCTCACCATAGCCTTCGGCCTCTATTATTTGGCTACACATTACTTCCATCACCTCCCGCGGCCTCTCTCTTTCTTGGCCTGGCCAATTTACTGGGCTATTCAAGGCTGCGTCCTCACCGGCGTCTGGGTGATCGCTCACGAGTGTGGCCACCACGCGTTCAGCGATTACCAATGGCTGGATGACACCGTTGGCTTCGTTCTCCACTCCTCCCTCCTGGTGCCTTACTTCTCATGGAAATACAGCCATCGCCGTCATCACTCTAACACCGGATCTCTTGAGCGCGATGAAGTCTTCGTGCCAAAGAAAAAGTCCGGTGTTAGTTGGTACACTCCATACCTTAACAATCCACCAGGCCGAGTCGTAACCCTTGCGTTTACTCTCACTCTTGGCTGGCCTCTCTACCTTGCTTTTAACGTTTCAGGAAGGCATTATGATCGTTTTGCCTGCCACTATGACCCATACGGTCCCATCTACTCAGATCGTGAACGGCTCCAAATATACTTATCAGATGCAGGGGTGCTCGCTGTGTTCTATGGGCTTTACCGCCTTGCCGTGGCGAATGGACTTGCCTGGCTCGTTTGTGTTTATGGAGCGCCATTGTTGGTGGTCAATGGATTTTTGGTGTTGATCACTTTTTTGCAGCATACTCACCCAGCATTGCCACACTATGATTCCTCCGAGTGGGACTGGTTGAGGGGGGCTTTAGCCACGGTGGACAGAGATTATGGTATTTTGAACAAGGTTTTCCACAATATTACAGACACTCATGTAGCGCATCATCTGTTCTCCACGATGCCTCATTATCACGCAATGGAGGCTACAAAAGCAATCAAGCCTGTTTTGGGAGAATACTATCAGTTTGATGGGACCCCAGTTTACAGGGCAATGTGGAGGGAGGCAAAGGAATGTATTTACGTCGACTCTGATGAAGGCGCTGGGACCAAAGGTGTATTCTGGTACAAGAACAAGCTCTGA 1152 0.513 MGAGGRSSVPPALRKSKTETVKRSPVEQPPFTLGQVKKAVPPHCFNRSVVRSFSYVLYDLTIAFGLYYLATHYFHHLPRPLSFLAWPIYWAIQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGFVLHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSGVSWYTPYLNNPPGRVVTLAFTLTLGWPLYLAFNVSGRHYDRFACHYDPYGPIYSDRERLQIYLSDAGVLAVFYGLYRLAVANGLAWLVCVYGAPLLVVNGFLVLITFLQHTHPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPVLGEYYQFDGTPVYRAMWREAKECIYVDSDEGAGTKGVFWYKNKL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3185 383 CDD Delta12-FADS-like 47 329 - -
Prci1g3185 383 MobiDBLite consensus disorder prediction 1 26 - -
Prci1g3185 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 16 382 IPR012171 GO:0016491
Prci1g3185 383 Pfam Fatty acid desaturase 85 345 IPR005804 GO:0006629
Prci1g3185 383 Pfam Domain of unknown function (DUF3474) 22 66 IPR021863 GO:0016717
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3185 Prci-Chr1 49773569 49777417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3185 1 383 Lipid Metabolism Gene Families AT3G12120 75.457 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3185 K10256 - gmx:100805040 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3185 1 49773569 49777417 Prci1g3185 1 49773569 49777417 ECH