Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3158 ATGGCATCAAAACAAGGTGCAAAATCAAAAAAATTAGGATTGAACAATTTAAAAGCTGCTAATTCTCCATCATCTTCCACTACCTCATCGTCGAAACAATTTCTGGAAGCTTCCATTGATGGTCACAGCTCACCAGCATCTTCATCATCTCGAAGTAAGCCACAGCATTTTTACTCAGAAAGCGTGCCTTTATATGCAGAGAGAGCAAAAGAAAATGTCACAGTGACAGTCCGATTTCGCCCCCTGAATCCAAGAGAAATACGTCAAGGAGAGGAGATTTCGTGGTATGCAGACGGAGAAACTATTGTGCGAAATGAGTATAATCCATCCATAGCATATGCATATGACCGTGTCTTTGGTCCTACAACCACAACACGTCATGTTTACGATGTTGCTGCTCAGCATATTGTCAACGGTGCTATGGAGGGCATCAATGGTACAATATTTGCATATGGGGTAACAAGCAGCGGAAAGACTCATACAATGCATGGTGATCAAAGGTCTCCTGGAATTATACCTCTTGCTGTGAAGGATGCATTTGGCATTATCCAGGAGACTCCAAACCGAGAGTTTCTCCTTCGAGTTTCATACTTGGAGATCTACAATGAGGTGGTTAATGACTTGCTGAATCCAGCTGGACAGAACTTAAGAATCAGAGAGGATGCTCAGGGCACCTTTGTTGAGGGAATAAAGGAGGAGGTAGTTCTTTCCCCTGCTCACGCACTTTCCCTTATAGCAGCTGGGGAAGAGCATAGACATGTTGGGTCCACAAACTTCAACATACTCAGCAGCAGGAGTCATACCATATTTACCTTGACTGTTGAGAGTAGTCCATGTGGCAAAAATAGCGAAGGAGAAGCTGTAACACTGTCGCAACTGAACCTCATCGATCTGGCAGGTTCTGAGAGCTCAAAGGCTGAAACAACTGGAATGAGAAGGAGAGAAGGATCTTATATCAACAAGAGTCTGCTAACTCTTGGCACTGTTATTTCAAAATTGACTGAAGGGAGAGCTAGTCACGTACCTTATAGGGACTCCAAATTGACCAGATTACTACAGTCTTCACTCAGCGGTCACGGACGTGTCTCTCTCATTTGCACAGTAACTCCTTCATCAAGTAGCGCTGAAGAGACACACAATACATTGAAGTTTGCACACCGGGCAAAGCACATTGAAATACAAGCAGCCCAAAACAAGATAATTGATGAGAAGTCGCTTATTAAGAAATACCAACATGAAATTCAATGCTTAAAAGAAGAGCTAGAACAATTGAAGAGGGGCATAGTCACAGTTCAACCAAGAGGTACAGGCGAAGATGACATTGTGCTCCTAAAACAAAAGCTAGAAGATGGTCAAGTTGCACTGCAATCGAGATTGGAACAAGAAGAGGACGCTAAAGCTGCTTTACTAAGCAGGATTCAACGGTTGACGAAGTTAATTTTGGTCTCCACAAAAGCATCACACCCGTCAAGATTTCCTAACCGGTCTGGTCCACGAAGAAGGCATTCCTTTGGCGAGGAAGAGCTGGCATACCTTCCATACAAAAGGCGGGATTTAATCCTAGATGAGGAAAATATTGATTTATATGTTAATCTAGAGGGAAATGCAGAATCAGCTGATGATTCTCTTAAGGAGGAGAAAAAGACAAAGAAGCATGGACTCCTGAATTGGTTGAAGTTACGGAAACGAGACAGTGGATCAAGTGCCTTGACAGGCACTAGTGATAAATCCAGTGGAGCAAAATCTGTTAGTACACCTTCCACCCCTCAAGCAGAAAGGGGCAATCATACAGAGTCCAGGCTTTCCCATTCTCTACGTACAGAAAGTTCTCCGTCTGTGGATCTTATATTGGAGGCTAAAGAGGACAAGGAAAATCATGGAGATAGTTTGTTGGGACAAGAGACACCTTTGACAAGCATAAAATCAATCGATCAAATTGATCTTCTGAGGGAGCAGCAAAAGATTTTGTCTGGGGAGGTGGCACTTCATTCAAGTGCTCTGAAAAGACTATCTGAAGAAGCAGCAAAAAATCCTGGGATGGATCAGATTCAAGTGGAGATGAAAAGGCTGAAAGATGAGATAAAGGCTAAGAATGAACAAATAGATTTGCTTGAAAAACAAATTGCTGCTTCCTTCATTACTTTAGACAAGATGGATCAATCAGGAGTATCACATACCGTTGAGGAATTGGTGACACAATTAAATGAGAAATCCTTTGAACTTGAGGTTAAAGCTGCAGATAACCGTGTAATACAAGAGCAGCTCAATCAAAAGATACGTGAATGTGAAGGCCTTCAAGAAACAATTGCCTCCCTGAAACAGCAGCTTGCGGATGCGCTTGAGTTAAAAAGCTTTGGCCCTGTAGATCATTCACAGCATTTCTCTATAACCAAAGAACACCATGGTGAACGCCACCTGTACGAAGAAAATGTGATGATGAGCCAGTCCAATGAAGGTTTTCTTTTACAAGCACAGATAGAAGAATTGAAGTTGAAGGTGGCTGAATTAACAGAATCAAAGGAGCAGCTGGAAATTCGGAATCAGAAACTTGCAGAAGAGAGTTCATATGCCAAAGGATTGGCCTCAGCTGCCGCAGTTGAGCTTAAGGCACTATCAGAAGAAGTTGCCAAACTAATGAACCATAATGAGAAACTTGCTGCTGAGCTGGCTGCATCCAAAAGTTCCCCCACCCAACGTAGAAACAGTACGGTAGTCCGAAATGGCCGAAGGGAAAGTCATGTCAAACGAACTGATCAAGGGGCGTCAAACACAGATATTAAGAGAGAACTGGCCCTGAGTAAAGAGAGGGAACAGTCTTATGAAGCCGCTCTTTTGGAGAAGGATCACAAAGAGGCTGAGCTTCAAAGGAAGATTGAGGATTCAAAACAAAGAGAAGCGTACTTGGAAAATGAACTTGCTAACATGTGGGTTCTCGTGGCCAAGTTAAAAAAGTCGCAAGGAACCGAAACTGATGATTCTAGGTTGACTAGAGAGACTTTGCAAGCGGACGGTTTTGACATTTGA 3024 0.4286 MASKQGAKSKKLGLNNLKAANSPSSSTTSSSKQFLEASIDGHSSPASSSSRSKPQHFYSESVPLYAERAKENVTVTVRFRPLNPREIRQGEEISWYADGETIVRNEYNPSIAYAYDRVFGPTTTTRHVYDVAAQHIVNGAMEGINGTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFGIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTFVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNFNILSSRSHTIFTLTVESSPCGKNSEGEAVTLSQLNLIDLAGSESSKAETTGMRRREGSYINKSLLTLGTVISKLTEGRASHVPYRDSKLTRLLQSSLSGHGRVSLICTVTPSSSSAEETHNTLKFAHRAKHIEIQAAQNKIIDEKSLIKKYQHEIQCLKEELEQLKRGIVTVQPRGTGEDDIVLLKQKLEDGQVALQSRLEQEEDAKAALLSRIQRLTKLILVSTKASHPSRFPNRSGPRRRHSFGEEELAYLPYKRRDLILDEENIDLYVNLEGNAESADDSLKEEKKTKKHGLLNWLKLRKRDSGSSALTGTSDKSSGAKSVSTPSTPQAERGNHTESRLSHSLRTESSPSVDLILEAKEDKENHGDSLLGQETPLTSIKSIDQIDLLREQQKILSGEVALHSSALKRLSEEAAKNPGMDQIQVEMKRLKDEIKAKNEQIDLLEKQIAASFITLDKMDQSGVSHTVEELVTQLNEKSFELEVKAADNRVIQEQLNQKIRECEGLQETIASLKQQLADALELKSFGPVDHSQHFSITKEHHGERHLYEENVMMSQSNEGFLLQAQIEELKLKVAELTESKEQLEIRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNHNEKLAAELAASKSSPTQRRNSTVVRNGRRESHVKRTDQGASNTDIKRELALSKEREQSYEAALLEKDHKEAELQRKIEDSKQREAYLENELANMWVLVAKLKKSQGTETDDSRLTRETLQADGFDI 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3158 1007 Gene3D Kinesin motor domain 64 422 IPR036961 -
Prci1g3158 1007 Coils Coil 748 782 - -
Prci1g3158 1007 Coils Coil 445 479 - -
Prci1g3158 1007 ProSitePatterns Kinesin motor domain signature. 291 302 IPR019821 GO:0003777|GO:0005524|GO:0007018
Prci1g3158 1007 Coils Coil 868 888 - -
Prci1g3158 1007 Coils Coil 529 549 - -
Prci1g3158 1007 Coils Coil 680 707 - -
Prci1g3158 1007 PRINTS Kinesin heavy chain signature 143 164 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g3158 1007 PRINTS Kinesin heavy chain signature 341 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g3158 1007 PRINTS Kinesin heavy chain signature 257 274 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g3158 1007 PRINTS Kinesin heavy chain signature 292 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g3158 1007 MobiDBLite consensus disorder prediction 888 924 - -
Prci1g3158 1007 Coils Coil 826 853 - -
Prci1g3158 1007 CDD KISc_CENP_E 72 391 - -
Prci1g3158 1007 MobiDBLite consensus disorder prediction 15 55 - -
Prci1g3158 1007 MobiDBLite consensus disorder prediction 566 595 - -
Prci1g3158 1007 ProSiteProfiles Kinesin motor domain profile. 72 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g3158 1007 MobiDBLite consensus disorder prediction 904 924 - -
Prci1g3158 1007 PANTHER CENTROMERE PROTEIN E 69 988 IPR027640 GO:0003777|GO:0007018
Prci1g3158 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 426 IPR027417 -
Prci1g3158 1007 Pfam Kinesin motor domain 78 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g3158 1007 Coils Coil 393 427 - -
Prci1g3158 1007 MobiDBLite consensus disorder prediction 987 1007 - -
Prci1g3158 1007 Coils Coil 951 971 - -
Prci1g3158 1007 SMART kinesin_4 70 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci1g3158 1007 MobiDBLite consensus disorder prediction 565 612 - -
Prci1g3158 1007 FunFam Kinesin-like protein KIN-7G 64 422 - -
Prci1g3158 1007 MobiDBLite consensus disorder prediction 1 55 - -
Prci1g3158 1007 MobiDBLite consensus disorder prediction 987 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3158 Prci-Chr1 49580268 49594878 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3158 1 723 Miscellaneous Gene Families AT5G06670 71.703 0.0 955
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3158 K11498 - qsa:O6P43_005812 1598.95