Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3156 ATGTCCGGGAAAGCATCAAGTTCAAAGCCTAATATAGATTTGAGTGGATCCGGTGGTCTTTCACATGCTTACATTCAGTATCCGCCATTACAGTGCAGCAATCCTGGATCAAAGGGTTTGTTTTATGATGACGGAAATAAACTTCTACTTTCCCCAACATCTGATCAGGTCTTCTCTTGGAAAGTTGTTCCCTTTGATCCTCATGTCAGTCCAACCATTGATCCAATAGGTGAAGGCCCCATCATATCTATTCGGTATTCTTTAGATATGAAGGTCATAGCAATCCAAAGGTCAGATCATGAGATACAATTTTGGAATAGAGAGACTGGGGAAACATTTACTCATACGTGCAGGACTGAATCTGAAAGCATGCTTGGATTTTTTTGGACAGATAGTCATATCTGTGATATTGTTCTTATCAAGACTAGTGGACTAGACATGTATGCATATAACTCTGAGTCAAAATCACTACAATTAGTGGAGACAAAGAAATTGAATGTTAGTTGGTATGCTTACACACATGAAAGTCGTTTGGTTCTACTTGCTTCAGGAATGCAGTGCAAGACATTTCATGGATTTCAGATTTCTTCTGCAGATATTGTTCGCCTGCCGAGGTTTGAGATGGTTATGGCCAAATCTGAAGCAAATAGTAAGCCTGTTTTAGCAGCTGAAGACATCTATATCGTTACTGTTTATGGTAGGGTATACTGCTTACAGTTTGATAGAGTTGCTATGCTCCTCCATTCGTACAGGCTGTACCGTGATGCTGTGATACAGCAGGGTTCTTTGCCAATTTATTCAAGCAGGATCGCTGTGAGTACAGTGGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTGGTTATACTGTATGATATATTTGCAGATTCTCGAGCTCCTATATCTGCACCACTTCCTCTATTGTTAAGGGGTCTCCCAAGGTCCAATTCTTTTTCATCTCGATCAACTGGTAGAGAAAGTGAGAGTTCAGATGCTAATGTTGTGAGTAATCACGGCACAGTTACCTATGCTGATACATGGTCTTTCCTGGTTCCTGACCTGATATGTGATGTGGCAAATAAGTTATTGTGGAAGATCCACTTGGACTTAGAGGCAATTTCTGCCAGTAGCTCAGAGGTTCCATCAGTGTTAGAGTTCTTGCAGAGGCGAAAGTTGGAAGCTAACAAGGCCAAACAATTGTGCTTGGGTATAGTACGCACCCTTATTCTAGAGCGTAGGCCGGTACCTATGGTTGCCAAGGCTATACATGTATTAATCACCTCTTACTCCCATTCAATTAAAACCAATCCCCATCTAAGGGGAACTAAATCCGACAAGACATCAGCTTCTGGTGCACAACATGCTGTTAGCCCTTTGACTGGTGCTGATGTGTCTGCTTTGGGAGCAGGTGCACTTGGAAAATCCATTGTGCATGAACCTGCTGCTAGAGTAGACAGTGGATCTCTTGATAAATCTTCTACTGTTTTGAGTTTGGATTCTGAGGGTGAGAGCAGATCTGCTAATCAAAGGGGCTATACACCAGGGGTCCGGGCTCACAGCGCTCATGTTACACGATCATCTTTGCAGTTTGGGCAAGAGGAGCCCCAACTTACTTCTCCTGCGATTTCACCTGATGAGATGTACAGCTTTGTCTTTGCTCCAGTTGATGAAGAAATGGTTGGAGATCCTTCTTACTTGGTCACTATCATTGTTGAGTTCCTTCACAGTGCTAATGCAGAAAAGGTTAGAATACTCCCGAATCTCTATGTTCTAACAATTCAACTGCTGGCCCGTAATGAGCGATATGCAGAACTTGGGTTGTTTATCATAAACAAGATTCTGGAACCCTCTAAAGAAGTTGCATTACAGCTCCTAGAGTCAGGTCGTCAAAATTCCCAAACCAGGAAGCTTGGTCTGGATATGCTGAGACAGCTTGGTTTACATCAGGATTATGTATTGTTGCTGGTGCAAGATGGATACTACCTAGAAGCCTTAAGATATGCTCGGAAGTACAAGGTGGATACGATCCGGCCATCGTTGTTCCTAGAAGAAGCATTTGTTTCCAAGGACTCCCGACATCTAGCTGCAGTTCTCAGATTCCTCTCGGATTTCCTTCCTGGTTTCAAGCACACTTCAGAACATAGCAGATACTATCGCATTCTTAATGACATGAACACGCCTGTGTCTGTCTGA 2196 0.4267 MSGKASSSKPNIDLSGSGGLSHAYIQYPPLQCSNPGSKGLFYDDGNKLLLSPTSDQVFSWKVVPFDPHVSPTIDPIGEGPIISIRYSLDMKVIAIQRSDHEIQFWNRETGETFTHTCRTESESMLGFFWTDSHICDIVLIKTSGLDMYAYNSESKSLQLVETKKLNVSWYAYTHESRLVLLASGMQCKTFHGFQISSADIVRLPRFEMVMAKSEANSKPVLAAEDIYIVTVYGRVYCLQFDRVAMLLHSYRLYRDAVIQQGSLPIYSSRIAVSTVDNVLLIHQVDAKVVILYDIFADSRAPISAPLPLLLRGLPRSNSFSSRSTGRESESSDANVVSNHGTVTYADTWSFLVPDLICDVANKLLWKIHLDLEAISASSSEVPSVLEFLQRRKLEANKAKQLCLGIVRTLILERRPVPMVAKAIHVLITSYSHSIKTNPHLRGTKSDKTSASGAQHAVSPLTGADVSALGAGALGKSIVHEPAARVDSGSLDKSSTVLSLDSEGESRSANQRGYTPGVRAHSAHVTRSSLQFGQEEPQLTSPAISPDEMYSFVFAPVDEEMVGDPSYLVTIIVEFLHSANAEKVRILPNLYVLTIQLLARNERYAELGLFIINKILEPSKEVALQLLESGRQNSQTRKLGLDMLRQLGLHQDYVLLLVQDGYYLEALRYARKYKVDTIRPSLFLEEAFVSKDSRHLAAVLRFLSDFLPGFKHTSEHSRYYRILNDMNTPVSV 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3156 731 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 19 723 IPR040371 GO:0010506|GO:0035658
Prci1g3156 731 Pfam Colon cancer-associated protein Mic1-like 564 703 IPR009755 -
Prci1g3156 731 MobiDBLite consensus disorder prediction 494 514 - -
Prci1g3156 731 SUPERFAMILY WD40 repeat-like 42 283 IPR036322 GO:0005515
Prci1g3156 731 MobiDBLite consensus disorder prediction 437 457 - -
Prci1g3156 731 MobiDBLite consensus disorder prediction 437 456 - -
Prci1g3156 731 MobiDBLite consensus disorder prediction 494 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3156 Prci-Chr1 49555711 49564206 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3156 K24763 - gmx:100788425 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3156 1 49555711 49564206 Prci1g3156 1 49555711 49564206 ECH