Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3113 ATGGAGAACCAGCAAGGAAAGGGCATCGTTTTCAAGAAATTCACGTGGGTAGTACAAGATTTCTCGAAAAACAAGACCAAGAAACAACGCTCCAAGGCTTTTGAAGCTGGTGGTTGTAAATGGCGAATCCTTGTGAATCCAATTGGGAAGGGTGAGGAATATTTGTCCTTGTTTCTGAAGGCTGCAAATTCTTTACCATTATATGGTTGGACCAGATATGTCTATTTCAAGCTGTCTCTCGTCAATCAGATCGACAGCGAGAGGTCCATTTCAAGAGAGACTCAACAGAAGTTCAATGCAGGACATAGTAGCTGGGGTGCATCATTCTTGCTTCTCAGTGACTTCTATAATACCATAAAAGGTTATCTTGCGAACGATTCATGCATCATAGAAGCTCAAATATCCGTCTCATATGTTGCTTTTAAGATTCCAGACAAAATCAGTAACCAAACACACGAGGAACAAGACAAAACAGAAGAATCCACAGAACAGCTTGAAGATCATCAATGCATATATTTCTCGGATGGGACGCCTAGTTACAAATCCTCTGATGAATACATATGGAATCAGTCAAGTCAAGCAGAATCAGAAATCCCACAGAAACAAGAAAAACAAGATATTGTTGGGGCACCAGCTGAGACACCAAGTCCTAATAAACCAGGGCATTATGAACCAACTGCTCCGCCTTTATATCCTCGTGTAGATGTATCACCCGTGGAAATACCCTTAAGCCCTCTTAGTGATCTTATAGATTATCAGAGTTTAAAGCCAGAGGAAGTAGGTTTTGTTCTATTACTAGAGGATGTTTGTTCACGGAATCCTTCACTGATAGAGAGCCAAAAGAAGAGAAGTCCCAAGTTCACACACTGGGCATTCATAGCTCTAGGTCAAGTTCTGCATTTTCTGAAGACTACGAAGGCGAAAAATATGGATGAATCTGCTTGTAACTACTTCCAAGGTCTATGGGAAGAAGTTCAGTTATTTGGATTTGACTTGACTTGGTTGGAGCCTCATGTGCAGTATGCCTTGGGAATGAAGGATTATTTGGAAAGGGCAAAGAAAGTGAAAAAACTGGAGGAGGAAGTGGTTGCTTTAGAGAATGAAATGAAGAAGCTGAGGGCATGTTTGGCAGCCACGGAAGTTGACCTTAATATAGAAAGGAGACACTTGAGAGGGGAAGAGAAGGGATTTGAGGAGAAAGACGTGGACGCTATATTGGACTATGGCATAATTTAG 1236 0.4142 MENQQGKGIVFKKFTWVVQDFSKNKTKKQRSKAFEAGGCKWRILVNPIGKGEEYLSLFLKAANSLPLYGWTRYVYFKLSLVNQIDSERSISRETQQKFNAGHSSWGASFLLLSDFYNTIKGYLANDSCIIEAQISVSYVAFKIPDKISNQTHEEQDKTEESTEQLEDHQCIYFSDGTPSYKSSDEYIWNQSSQAESEIPQKQEKQDIVGAPAETPSPNKPGHYEPTAPPLYPRVDVSPVEIPLSPLSDLIDYQSLKPEEVGFVLLLEDVCSRNPSLIESQKKRSPKFTHWAFIALGQVLHFLKTTKAKNMDESACNYFQGLWEEVQLFGFDLTWLEPHVQYALGMKDYLERAKKVKKLEEEVVALENEMKKLRACLAATEVDLNIERRHLRGEEKGFEEKDVDAILDYGII 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3113 411 CDD MATH 13 134 IPR002083 GO:0005515
Prci1g3113 411 SUPERFAMILY TRAF domain-like 13 136 - -
Prci1g3113 411 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 11 170 IPR008974 GO:0005515
Prci1g3113 411 MobiDBLite consensus disorder prediction 191 229 - -
Prci1g3113 411 Coils Coil 348 382 - -
Prci1g3113 411 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 383 - -
Prci1g3113 411 SMART math_3 13 115 IPR002083 GO:0005515
Prci1g3113 411 Pfam MATH domain 18 136 IPR002083 GO:0005515
Prci1g3113 411 ProSiteProfiles MATH/TRAF domain profile. 11 134 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3113 Prci-Chr1 49343280 49345534 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3113 - - gmx:102668441 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3113 1 49343280 49345534 Prci1g3113 1 49343280 49345534 ECH