Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3092 ATGGCTTATTTCTTCTCCCGGTTTTCCCGTCTGCGCTCTTCGTCGAAGTGTTTCTACGAGAATCTGAGAACCCTAAATTTCCATAACTTCAGGACCCAGAAAAATGCACACGCTAGAAATGTTATGGACTTCGAGAGAGCAAAGAAGCCATGGATGACATGGTCAAGCTCCGTGCTTCCTTTGGCTCTCGCATTTTCTGCCGGATCACTTGCTTTAAAACCCCAGTTCAATCCTTCATTATGTGACGCTCCTAATTCCAATAGTCGACTGGGGGGGAAAGATAGCACCCAGTTTGTGGTTAAGGGATCACAAAAAGAAATTCCACAGGTTCTTCTCAAGGAGTTGGAAGCCATCTGTCAGGATAACATGACACTTGATTACGATGAGAGATATATCCATGGAAAACCACAGAATAGCTTTCACAAAGCTGTTAACATACCTGATGTAATTGTTTATCCGAGATCTGAAGAGGAAGTCTCCAAAATTGTTCAAGCATGTAACAATTATAAGGTTCCTATTGTACCCTATGGTGGTGCTACATCGATCGAGGGTCACACCTTATCCCCTAATGGAGGGGTTTGCATTGACATGTCATTAATGAAAAGAGTGAAAGCATTACATGTTGAAGACATGGATGTGGTTGTTGAGCCTGGAATTGGATGGATTGAGCTTAATGAGTACTTAGAACCTTATGGTCTATTTTTTCCACTTGATCCAGGCCCTGGTGCAAGCATTGGAGGCATGTGTGCCACCCGCTGTTCTGGTTCATTGGCTGTCAGGTATGGAACTATGCGTGACAATGTCATCAGTCTCAAGGTAGTTCTTGCCAATGGAGATATTGTTAAGACAGCCTCTCGTGCAAGGAAGAGTGCAGCTGGGTATGATTTGACCCGCCTGATGATTGGAAGTGAAGGAACTCTTGGTGTAATAACAGAAGTAACACTGAGGCTTCAGAAAGTTCCCCAACATTCAGTGGTTGCAATGTGCAATTTTCCTTCTGTAAAGGATGCAGCAGATGTTGCTATTGCCACCATGATGTCTGGTATACAGGTTTCAAGGGTAGAGCTATTGGATGAGGTTCAAATGAAAGCTATCAATATTGCTAATGGGAAGAATTTGCCTGAATCTCCAACATTAATGTTTGAATTTATAGGGACAGAGGCATATGCTCGTGAACAAACGCAAATTGTTCAGAGAATTGTTTCTGAACACAGTGGCTCAGATTTTGTATTGGCAGAAGAACCTGCAGCTAAAAAAGAACTTTGGAAGATAAGGAAGGAGGCCCTTTGGGCGTGCTTTGCATTGAAGCCTGATTTGGAGGCAATGATTTCAGATGTATGTGTGCCTCTATCGCACCTTGCAGATTTAATTTCAAGGTCTAAAAAGGAACTGGATGCTTCTTCACTGGTTTGCACTGTAATTGCCCATGCCGGTGATGGTAATTTCCACACCGTTATTCTGTTTGACCCTACCCAAGAAGAGCAACGGCAGGAGGCAGAGAGACTGAACCAATTTATGGTTCATGCTGCCTTGTCATTGGAAGGAACTTGTACTGGTGAACATGGAGTTGGCACCGGGAAAATGAAGTACCTGGAAGAAGAACTAGGAGTGGAAGCATTGAGGACAATGAAGAAAATAAAAACAGTCTTGGATCCCAACAATATTATGAATCCTGGAAAGCTGATTCCTCCCCATGTTTGTTTGTAA 1707 0.4312 MAYFFSRFSRLRSSSKCFYENLRTLNFHNFRTQKNAHARNVMDFERAKKPWMTWSSSVLPLALAFSAGSLALKPQFNPSLCDAPNSNSRLGGKDSTQFVVKGSQKEIPQVLLKELEAICQDNMTLDYDERYIHGKPQNSFHKAVNIPDVIVYPRSEEEVSKIVQACNNYKVPIVPYGGATSIEGHTLSPNGGVCIDMSLMKRVKALHVEDMDVVVEPGIGWIELNEYLEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKVPQHSVVAMCNFPSVKDAADVAIATMMSGIQVSRVELLDEVQMKAINIANGKNLPESPTLMFEFIGTEAYAREQTQIVQRIVSEHSGSDFVLAEEPAAKKELWKIRKEALWACFALKPDLEAMISDVCVPLSHLADLISRSKKELDASSLVCTVIAHAGDGNFHTVILFDPTQEEQRQEAERLNQFMVHAALSLEGTCTGEHGVGTGKMKYLEEELGVEALRTMKKIKTVLDPNNIMNPGKLIPPHVCL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3092 568 Pfam FAD linked oxidases, C-terminal domain 321 561 IPR004113 GO:0003824|GO:0050660
Prci1g3092 568 SUPERFAMILY FAD-binding/transporter-associated domain-like 112 321 IPR036318 GO:0050660
Prci1g3092 568 Gene3D - 110 340 IPR016169 -
Prci1g3092 568 FunFam D-lactate dehydrogenase [cytochrome], mitochondrial 109 340 - -
Prci1g3092 568 Gene3D - 522 562 IPR016171 -
Prci1g3092 568 ProSiteProfiles PCMH-type FAD-binding domain profile. 143 320 IPR016166 GO:0071949
Prci1g3092 568 FunFam D-lactate dehydrogenase mitochondrial 440 521 - -
Prci1g3092 568 SUPERFAMILY FAD-linked oxidases, C-terminal domain 324 564 IPR016164 GO:0003824|GO:0050660
Prci1g3092 568 Gene3D - 440 521 - -
Prci1g3092 568 PANTHER D-LACTATE DEHYDROGENASE 84 564 - -
Prci1g3092 568 FunFam D-lactate dehydrogenase mitochondrial 522 562 - -
Prci1g3092 568 Pfam FAD binding domain 147 283 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3092 Prci-Chr1 49291854 49303046 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3092 K00102 - qsa:O6P43_009412 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3092 1 49291854 49303046 Prci1g3092 1 49291854 49303046 ECH