Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3090 ATGGATTCGGGAGCAATTCCATCTTCCACAAATTCAGTAAAATGTTGCGACTGCGCCTGCAGTTGTTCATTGGCAGCTGATTCTTCGGCAACCTGGCTTCGTACAGTCAAAAGGAAGCTTGGTGAGTTTGAACGGGACGACAAATTCTCTGTACCCGAGTTGGATTCATTTTCAGTTGCACGGGTCCAAATAGAAAATGAATGTGAAGCCTTACGGGAGACAGTTGCTAGGCAACTACAAGCAATACAAGATCTACACGCTGAATTGGAAGAGGAGAGAAATGCTTCATCAACGGCAGCAAATGAGGCCATGTCTATGATATTGAGGTTGCAGAGGGAGAAAGCAGAGATTCAAATGGAAGCCCGGCAGTTCAAGCGATTTGCAGAGGAGAAGACATCACATGACCAGGAGGAGCTTTTAGCACTGGAGGACTTGTTGTATAAGAGGGAGCTGACAATACAGGCGCTCACATGTGAAATTCAGGCTTATAAGCACAGGATGATGAGTTATGGTCTCACAGAATCAGAGGCTGCAGGTGAAATGAGCCTGAACATGGGGGAATTGAGTGATCAATATGAATTGCCCTCCTATGACTACCCTCCTTTAAAATGCAGTGGACATACTGCCATGGATGCTGACAATGATGAGACAGATATTGAGAAATATGCATTTGTTGAAACTCCTTCTGATAGGTTGAGAAACTTGGAAAATAGAATCTCCCAAATGGAGAGAAATTCTATTCATCAGCAGGTGGATGAGGATAATAAGACAGGGAAAACAATTCTAGAGAAGGAGGTAGTTGGACAGTCTCCAAGGCGGATTAGACATTCAAGAAAGATATCCAATGACTCAAGTTCATTTACGGTGGATTCTCCCAAGAGCTTTAGGAAGATGGAATATGTCTCACAACCAGATGATCGTTCCCATTTGAGAAGGGTAGATTATGCATCAGAAGCTGGTGATGATATGGGTGACAGAGTTTACACTATTGACTCTGTTCATACAGTGACACCAGACAAAGGTATTTCAGAGTCCAAAAGTGGAGTTGTTCATGAAGATTATTCGACTGCTCCAATGGAGACACTAAATCGTGCTGAATTTGAAGATCCTGACATAAAGAAGCTTTACGTGAGACTTCAAGCTCTTGAGGCTGATAGGGAATCAATGAGGCAGGCTATCATTTCAATGCGCACTGATAAAGCACAGGTTCTTCTGCTTAAGGAAATAGCTCAACATTTGTGCAAAGAGATGTCACCGCAAAGGAGAATGACAATGAGGAAGCCGTCTGTTATTAGCAGTTTTTCATTCTTGTCAATTTTTAAGTGGATGATATCGTTGGTTTTGTGGAGGAAAAAAGCTGGTCAAAGCAAGTATATGTTTGGGCTACCAGCCAGTGGTGTGGGCTTGCTAATGCTTTTGGACAAGAGGCCACGTGGAAGGCCTCGGAGATGCGTCTCAATCACCCAGGCATGCAAGGAGAACAAGAAGTTGACCAAGTCATATTTGACAAAACGAATTTGCAGCTGCACTCTGGCCCCACTTGCTTTGAGTTGA 1554 0.4356 MDSGAIPSSTNSVKCCDCACSCSLAADSSATWLRTVKRKLGEFERDDKFSVPELDSFSVARVQIENECEALRETVARQLQAIQDLHAELEEERNASSTAANEAMSMILRLQREKAEIQMEARQFKRFAEEKTSHDQEELLALEDLLYKRELTIQALTCEIQAYKHRMMSYGLTESEAAGEMSLNMGELSDQYELPSYDYPPLKCSGHTAMDADNDETDIEKYAFVETPSDRLRNLENRISQMERNSIHQQVDEDNKTGKTILEKEVVGQSPRRIRHSRKISNDSSSFTVDSPKSFRKMEYVSQPDDRSHLRRVDYASEAGDDMGDRVYTIDSVHTVTPDKGISESKSGVVHEDYSTAPMETLNRAEFEDPDIKKLYVRLQALEADRESMRQAIISMRTDKAQVLLLKEIAQHLCKEMSPQRRMTMRKPSVISSFSFLSIFKWMISLVLWRKKAGQSKYMFGLPASGVGLLMLLDKRPRGRPRRCVSITQACKENKKLTKSYLTKRICSCTLAPLALS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3090 517 Coils Coil 372 399 - -
Prci1g3090 517 Coils Coil 225 252 - -
Prci1g3090 517 ProSiteProfiles GTD-binding domain profile. 66 164 IPR007656 -
Prci1g3090 517 Coils Coil 61 130 - -
Prci1g3090 517 MobiDBLite consensus disorder prediction 268 288 - -
Prci1g3090 517 PANTHER BNAANNG28530D PROTEIN 62 432 - -
Prci1g3090 517 Pfam Zein-binding 70 160 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3090 Prci-Chr1 49259906 49264365 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3090 - - pcin:129286121 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3090 1 49259906 49264365 Prci3g2742 3 39629650 39633425 CCT
Prci1g3090 1 49259906 49264365 Prci1g3090 1 49259906 49264365 ECH