Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3045 ATGGATCCGGCGAAGACTCCGCTTGGCCAGATGCTACTGGACGAGATCACTCCGGTTGTGATGGTACTTTCTACTCCTAATGTCGAAGAGGCTTGTCTCAAGAATGGCCTTAGCTTCCTTCAGATGCTGACCCCATTCTGCTCCTTTAACAACATCGACGTGCCGGTAAGGACTGTCAGTGACCAGCCCTATAGGCTTCAGAAGTTCAAATTGCGATTATATTATGCTTCAGATGTCAGGAAGCCAGATTTGGAGGTAGCTAAAGAGCATTTAAAGCAAGTTATCACAGAGGCAGGGGAGAAAGAGTTCAGCGAGCTGAGCTTGGATGCGCCAGAAATTAATCACGTACTCGAGAATTCTCAATCCGGAAATGCACCATCCTGGCTTCAGTTTTTTAACAAAGAGCTTATCCGTGTGGTCTCCTTTTCAGACCATGAAGCTTTTGATCATCCAGTGGCATGTCTTTTGGTTGTTTCTTCTAAGGATGAACAACCAATTAACAGATTTGTTGACCTATTTAACACCAACAAGCTGCCTTCCCTTCTTAATGATGGCGTGATGGATCCAAAGATTTTGAAGCATTATCTTTTGGTGCATGATAATCAAGATGGCTCTTCTGACAGGGCAACTAAAATATTGACAGATATGAAGGGTACATTTGGTACTAGTGACTGTGCATTGCTATGTATCAATTCTTCTACTGATGCCTCAATCAAACGTGAAGAGAACTTTTGGGCTTCATATAATTCTGATGTTCCTCCTGGTCAAGATCTTGGTTGCTTTCTTAACACTGATGATATCACTATGATTAAAGATCTAATGCAAGATTTATCATCCAAGCACGTCATTCCAAGCATGGAGCAAAAGATTCGTGTGCTCAACCAACAAGTTTCTGCAACACGGAAAGGCTTTAGAAACCAACTTAAAAATTTATGGTGGAGAAAAGGGAAAGAAGATAGCACAGATTCTGTCAATGGTCCTATGTATGCCTTTAGCTCCACCGAATCCCAAATTCGAGTTTTGGGTGATTATGCTTTCATGTTAAGGGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCACGGATTACAAACTTGATAAAGCTTGGAAACGCTATGCTGGTGTACAGGAAATGATGGGACTTACATACTTCATGTTGGACCAATCAAGAAAGGAAGCTGAATATTGCATGGAAAATGCCTTTAACACTTATTTAAAACTTGGTTCGTCTGGGCAGCAAAATGCCACGCGATGTGGTCTCTGGTGGATAGAAATGTTGAAGACACAAAATCTATGCAAGGAGGCGGCTCCAATTTATTTCCGCATTTGTGGTGAGGATATCCTACATTCTGCTGTGATGCTTGAACAAGCGTCCTACTGCTACTTGTTGTCCAAACCTTCAATGTTACGTAAATTTGGGTTTCATCTTGTGCTTTCTGGGGATCGTTATAACAAGTGTGATCAGATCAAGCATGCAATTCGAACATACAGAAGTGCTCTTTCTGTTTTTAGGGGAACTACATGGAGTTATATCAAAGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTATTGGGATGTGTGATGTGGCTGTCAAGCATATGTTGGAAATTTTGGCTTGTGGTCACCAGTCCAAGACAACACAGGAGTTATTTTTGGGCGACTTTCTTCAAATAGTTCAGAAAACAGGACGAACATTTGAAGTATCAAGACTTCAGTTGCCTGTAATCAACTTTTCTTCTCTCAAGGTCATCTTTGAAGACCACCGAACTTTTGGATCGCCTTCAGCTGCTAACACTAGAGAAAGCTTGTGGCGTTCCTTGGAGGAAGAAATGATACCAGCTTTCTCTACTACCAAGAGTAATTGGCTGGAGTTGCAATCAAAGCTTATTCCAAAGAAATACAGAGAATCAAATGTTTGTATTGCAGGAGAAGCTGTGAAGTTGAATGTCGAATTCAAAAACCCTCTGCAAATACCAATTCCTGTGTCTGGAGTTACCCTTATATGCAAGCATTCTCCCAGTACTGTTGAAGGAAGACCTGATGAAAATATTTCAAGGATGGAAAATGATAATGCGGGTAAATGTGAAGAATTGACAGTCTGCATGCACATGAACTCTGAGAATTCTTCTTTTTCGGTGTTGGAGGTTGACTTCTTATTAAGAGGTGGTGAAACAACCATGGTGCAACTATCAGTTACTCCAAGAGAAGAAGGTACTTTGGAAGTTCTGGGTGTTAGGTGGAAGTTGTTGGGTTTCATAGTCGGCTTTCATGACTTTGACTTTAATCATGTAAAGAAGAACAATTTAAAAGGAAAGAGGAAAGAGAAGCGCTCAACTAATGAAAACTTCAAGTTTTTAGTGATTAAGAGCATACCAAAGCTTCAAGGGTCCATTCACCCTTTCCCTGACAAGGCATATGTGGGAGATCTACGGCACCTTGTTTTGGAGTTGAGAAACCCATCAGAGTTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCATCCTAGATTTCTGAATATTGGAAATCAGGAAAGCATGAAGTCAAAGCTTCCTGCTTGCTTAATGAAGAAGGTAGATTCAGTACCAAGTGGTGCAAACGCTGATCCATTTAACATGTCTGACACAGCCTCTCTGTTTCCCGAGGAAACGTCAGTTCAGGGTGCTATGCCCTTCTCATGGCCTCTTTGGTTTAGGGCAGCTGTTCCTGGTGACATTTCTCTATATATAAGCATATATTATGAAATTGGAGATATATCAAGTGTCATCAAATACCGTATTCTTCGGTTACAATACAATCTACAGGTAATGCCATCATTGGACGTGTCTTTTCAAATTAGTCCTTCTCCTTTGAGATTACAAGAGTTCCTTGTTCAAATGGATGTTGTTAACAAGACAGCCTCAGAAGATTTCCAAGTTAACCATCTGTCCTCTATTGGGAGCAACTGGGAAATATCATTGCTTCAGCCTGCTGATACTATTTTTCCTTCACAATCATTGAAGGCTGGTCAAGCAATTTCATGTTTCTTAATGCTAAAGAATTGCAGGAGCCTATTGACTGCTAAGGACAATATATCTTTGGTTCCTAAGCCTATCAAAAATGATATCAAATTGGTGCATCAAGGTAGCGAGGATTCAGTTTACGATATGAGTAGGGAGCCTTTGGTCAATTTTCACCATTATGAAAGATTGCAGCAGGAATTACTGCATGAGGTGCAGGGAGACCTGAACACTGTTGATTTTGTATTGATCTCTCGGCCACTGCAGAGTAACAGTAGTGCTGGGTTTGCTGACACTCCTCTTGTCATGTCTCATTATGCATGCCATTGCAGTACTGCAAGCACAGGCCCTATTTCGTGGTTATTGGATGGCCCTCGAACCTTACATCATAATTTCTCGGCATCCTTTTGTGAAATAAATCTGAAGATGCATCTTCACAATTCCTCTGATGTCACTGCTTTTGTGCGCATTTCCACCTCAGATTCTGCTGTCAATGGTGGACATCTGAACATCCTAAACATGGTTCAGTCATCTTCTCCTTCTGATGATCGAGGAGGGTGGCATCATGTCACCCCAGTGAATGAAGTAAAAGTCACATCAAACGTTAGCGGGACACAACCGGAAGAGTCTCTATCATTAGGAAGTGTCTCCCCGTACATTTGGTCTGGATCAAGCTCGACCAATATCCACCTAGAGTCTATGTCCTCAGCTGAAATTCCTCTTCAGATCTGTGTGTTCTCTCCTGGTATATATGATCTGTCAAATTACGCATTGCATTGGAATCTTCTCCTGGCCGAAGGTCGGGGAGATCAAGATGAAACGAGGCAGCGGTCAGGAAAGTGCGTTGGATATACATACTACCTAACTGTGCTCCAATCCACTTGA 3894 0.415 MDPAKTPLGQMLLDEITPVVMVLSTPNVEEACLKNGLSFLQMLTPFCSFNNIDVPVRTVSDQPYRLQKFKLRLYYASDVRKPDLEVAKEHLKQVITEAGEKEFSELSLDAPEINHVLENSQSGNAPSWLQFFNKELIRVVSFSDHEAFDHPVACLLVVSSKDEQPINRFVDLFNTNKLPSLLNDGVMDPKILKHYLLVHDNQDGSSDRATKILTDMKGTFGTSDCALLCINSSTDASIKREENFWASYNSDVPPGQDLGCFLNTDDITMIKDLMQDLSSKHVIPSMEQKIRVLNQQVSATRKGFRNQLKNLWWRKGKEDSTDSVNGPMYAFSSTESQIRVLGDYAFMLRDYELALSNYRLISTDYKLDKAWKRYAGVQEMMGLTYFMLDQSRKEAEYCMENAFNTYLKLGSSGQQNATRCGLWWIEMLKTQNLCKEAAPIYFRICGEDILHSAVMLEQASYCYLLSKPSMLRKFGFHLVLSGDRYNKCDQIKHAIRTYRSALSVFRGTTWSYIKDHVHFHIGQWYASIGMCDVAVKHMLEILACGHQSKTTQELFLGDFLQIVQKTGRTFEVSRLQLPVINFSSLKVIFEDHRTFGSPSAANTRESLWRSLEEEMIPAFSTTKSNWLELQSKLIPKKYRESNVCIAGEAVKLNVEFKNPLQIPIPVSGVTLICKHSPSTVEGRPDENISRMENDNAGKCEELTVCMHMNSENSSFSVLEVDFLLRGGETTMVQLSVTPREEGTLEVLGVRWKLLGFIVGFHDFDFNHVKKNNLKGKRKEKRSTNENFKFLVIKSIPKLQGSIHPFPDKAYVGDLRHLVLELRNPSEFPVKNLKMKISHPRFLNIGNQESMKSKLPACLMKKVDSVPSGANADPFNMSDTASLFPEETSVQGAMPFSWPLWFRAAVPGDISLYISIYYEIGDISSVIKYRILRLQYNLQVMPSLDVSFQISPSPLRLQEFLVQMDVVNKTASEDFQVNHLSSIGSNWEISLLQPADTIFPSQSLKAGQAISCFLMLKNCRSLLTAKDNISLVPKPIKNDIKLVHQGSEDSVYDMSREPLVNFHHYERLQQELLHEVQGDLNTVDFVLISRPLQSNSSAGFADTPLVMSHYACHCSTASTGPISWLLDGPRTLHHNFSASFCEINLKMHLHNSSDVTAFVRISTSDSAVNGGHLNILNMVQSSSPSDDRGGWHHVTPVNEVKVTSNVSGTQPEESLSLGSVSPYIWSGSSSTNIHLESMSSAEIPLQICVFSPGIYDLSNYALHWNLLLAEGRGDQDETRQRSGKCVGYTYYLTVLQST 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3045 1297 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 637 834 IPR013935 -
Prci1g3045 1297 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 166 518 IPR024420 -
Prci1g3045 1297 PANTHER TRANSPORT PROTEIN TRAPP 3 1296 IPR024420 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3045 K20305 - gmx:100809666 1984.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3045 1 49007478 49035229 Prci1g3045 1 49007478 49035229 ECH