Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3033 ATGGGAATGGAGTCAGGAACACAAGTGAAGGAAGGAGGTTGGTGGAGCTGCCTCAAGAATTTGCCTCACAAGTCCAAGTCCAATGTTATGAGCTTCGCGGAGGACATCAAGAAGATCGGAAAAGATGATCCAAGGAGAATCACTCACTCTCTAAAAGTAGGATTAGCTCTCACGCTAGTTTCTCTGGTATACTACTGGAGGCCTCTTTATGACGGCTTTGGTGTTGCGGGAATGTGGGCTGTTCTTACTGTCGTTGTAGTGTTTGAGTTCACCGTAGGTGCAACCCTGAGTAAAGGCATAAATAGAGGATGTGCAACATTAGTAGCAGGAGCTCTAGGATTTGGAAGTCAACACTTGGCTAATTTGTTTGGAGAAAAAGGAGAGCCTGTTGTGCTCGGGGCCCTTGTATTCATCCTGGCGGCAGGCTCTACATTTTCGAGGTTTTTCCCCAAGATAAAGGCAAGATATGATTATGGGATGGTGATATTCATATTGACCTTCAGTCTGGTCGCAGTGTCAGGCTACAAAATGGAGAATCTCTTCGAGCTTGCTCATCAGAGGTTCTCGACCATTATAATAGGGGGAGCGACGTGCATGGTCATATCCTTATTCGTTTGTCCAGTTTGGGCAGGCGAAGACCTTCACAAGTTGGTCGCTTCCAACATCGAGAAGCTGGCTACTTACCTAGAAGGTTTCGAAGGTGAATACTTTCAGTACTCAGACGATAAAGCAAAACCTGAAAAATCAAAACTTGAAGGATACAAGAGTGTTCTGAATTCCAAGGCAACTGAAGAGTCCTTGGCAAATCTAGCAAGGTGGGAACCAGGGCATGGTCGATTTCGTTTTCGCCATCCTTGGAAACAATACCTCAAGATCGGAGCACTTTCTCGCAAATGTGCTTACAAGATGGAAGCTCTCAATGGTTATCTTAGCTCTGAAATCCAAGTGTCTTTAGAGTTTAATAGGAAAGTTCAGGAATCATGCATGAAGATGACTTCTGAATCGAGCATCGCACTGAAAGCATTATCTTTGTCTATCAAAACAATGAAAGAGCTGTCTGAAGTAAAACCCCACCTGGAGAATTCCAAGATCGCAATTGAAGACTTCGAAATCGCAGTCCAAACAGCTTCCTTAGAGGACATAGACGTCTTAGCGATAGTTCCAATTGCCACGGTGGCATCCATACTCGTAGAAATCACAAAGACAGTGGAGGAAATCTATGAAGCTGTCTCTGAGCTCTCCAACTTGTCTCATTTCGATAAAGTGGAGCCTAATGTCTCGCCGGAGAAGCCAAACCGACTTCATCGTGGAGTTATAAATCCTGTCGCAGACAGTGGAAGTGCAGATCATATTGAGATTATTACCATCCAAGATTCGAACACAACAGTGAAGGAAGTTGCAGCACCAAAATCCAACCCAGAGGATGTATCCTGTAAATAG 1440 0.4451 MGMESGTQVKEGGWWSCLKNLPHKSKSNVMSFAEDIKKIGKDDPRRITHSLKVGLALTLVSLVYYWRPLYDGFGVAGMWAVLTVVVVFEFTVGATLSKGINRGCATLVAGALGFGSQHLANLFGEKGEPVVLGALVFILAAGSTFSRFFPKIKARYDYGMVIFILTFSLVAVSGYKMENLFELAHQRFSTIIIGGATCMVISLFVCPVWAGEDLHKLVASNIEKLATYLEGFEGEYFQYSDDKAKPEKSKLEGYKSVLNSKATEESLANLARWEPGHGRFRFRHPWKQYLKIGALSRKCAYKMEALNGYLSSEIQVSLEFNRKVQESCMKMTSESSIALKALSLSIKTMKELSEVKPHLENSKIAIEDFEIAVQTASLEDIDVLAIVPIATVASILVEITKTVEEIYEAVSELSNLSHFDKVEPNVSPEKPNRLHRGVINPVADSGSADHIEIITIQDSNTTVKEVAAPKSNPEDVSCK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3033 479 Pfam Aluminium activated malate transporter 38 414 IPR020966 GO:0015743
Prci1g3033 479 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 23 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3033 Prci-Chr1 48913292 48915577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3033 1 476 Miscellaneous Gene Families AT3G11680 54.175 6.62e-177 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3033 K25841 - gmx:100170704 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3033 1 48913292 48915577 Prci1g3033 1 48913292 48915577 ECH