Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3032 ATGGCCACCCAGAGTCAAACTTCCCCGTCTTCCAACGCGTTTTCCTTCATCTCCAAGGGCTGGCGGGATGTTCGAGACTCTGCTGATGCCGATCTCCAATTGATGCGAGACCGAGCCAACTCCTTCAAGAAACTTGCTACCTCTTTCGACCGCGAGCTGGAGAACTTCTTCAATTCGGCTTCCCCGTTTTCCGTTCCGACCATGCGGGCCTCCCCACAGGCCGAGATTGATTTTGTAAAGAAGTTGCAGCCCAAGCTGTCTGAAATTCGACGAGCCTATTCTTCACCTGATTTCAGTAAGAAGGTTCTCGAGAAGTGGCGGCCCAGGTCGAGGATTCGGATCGACTTGTCGGCGATAAAGAATGCAATTGTTTCCGAGGTTGAGGATGGGGATGAAATTCTTGATTTTGATAGGGGTAAGAGAGCTAGGAGATTGAACTTTAGGGAGTTCTGGGGGGAGTGGAAACGAGAGGGTGAAGCGGATGGGGAAGGGCAGTCCGCTAGGGATTGGGAGCCAATTCGTGCCTTGAAGACAACGTTAAAAGAGTTCGAGAAACGGAGGTCGTCCGTAGAGATTTTTGATGGATTCAAGAATGGCGAATTTGTGGAGAAACTAAAATTGGGCTTGAAATCGATGTGCATGGAGCCTCAGGAGTCAAAGGAAGTGCCACCTTTGGATGTGCCTGAACTTTTGGCCAGTTTTGTTAGGCAATCTGAGCCATTTTTGGATCAACTTGGAGTCAGAAGAGAGATATGTGACAAGATAGTGGAAAGCTTGTATAGCAAACGCAAAAACCAACATTTTCTGCAGTCCCTATCTGGGGAAGAATCTTCTGCTCTTGGGAATGGAAATATAAATGATGACTTGGATTTGCGAATAGCAAGTGTCCTTCAGAGCACAGGGCACCGATATGATGGTGGGCTCTGGGCAGAACATTCAAAGCATGATTCATCAGGCACTGAAAGACATGTTGCAATAGTTACAACTGCCAGTCTTCCTTGGATGACAGGAACAGCTGTGAATCCACTATTTCGAGCAGCATATCTATCACAATCTGCAAAGCAAAAAGTTACTTTACTGGTTCCGTGGCTTTGTAAGTCAGATCAAGAACTAGTTTATCCTGGCAATCTCACTTTCAGTTCACCAGAAGAGCAGGAAGTTTATATACGGAATTGGCTTGAGGAAAGGATTGGTTTCAAGCCAGACTTTAAAGTTTCCTTTTATCCTGGGAAGTTTTCAAAAGAAAGGCGAAGTATTATACCTGCTGGAGACACTTCTCAGTTCATTCCATCCAAGGAAGCAGACATTGCTATACTGGAAGAACCTGAACATTTGAATTGGTACCATCATGGTAGGCGTTGGACAGACAAATTCAACCATGTTGTTGGTATTGTTCACACAAATTACTTGGAATACATTAAGAGAGAGAAAAATGGGGCCCTCCAAGCATTCCTTGTGAAACACATAAACAACTGGGTGACAAGAGCATACTGCCACAAGGTTCTTCGTCTTTCAGCTGCCACTCAGGATTTACCCAAGTCTGAAATTTGTAATGTTCATGGTGTGAATCCCAAGTTTCTGAAAATTGGGGAGAAGATTGCTGCAGAGAGGGAGCTTGGGCAGAAAGCCTTTACAAAAGGCGCATATTTCTTGGGGAAGATGGTATGGGCGAAGGGATATAAGGAATTGATAGATTTATTAGCAAAGCATAAGAGCGATCTTGATGGCTTCAAGTTGGATGTATTTGGAAATGGAGAGGACGCTCATGAAGTTCAGAGTGCAGCTAGAAGATTGGATCTAAATCTCAACTTTCAGAAAGGAAGAGACCATGCGGATGATTCTCTTTATGGGTACAAAGTCTTCATAAATCCTAGCATCAGTGACGTGCTCTGCACAGCTACAGCTGAGGCGCTTGCCATGGGAAAATTTGTAGTGTGTGCTGATCATCCATCAAATCAGTTCTTTATGTCATTCCCAAACTGTTTGACTTACAGGACATCGGAAGACTTCGTGGCGAAAGTAAAAGAAGCTTTAGCCAATGAACCCCATCCTCTTACCCCTGAGCAAAGATATCAACTTTCATGGGAAGCTGCTACGCAGAGATTCATGGAATATTCTGAGCTTGACAAAGTCTTGAATGGAGAGAAAGACGGAGGAAAGGTTGTTGCAAGGTCCGCGTCAATGCCTAATCTGACAGAACTAGTAGATGGAGGCTTGGCTTTTGCTCACTATTGCTTCACTGGTAATGAATTCCTGAGGCTTTGTACTGGAGCAATACCTGGTACACGTGACTATGATAAGCAGCACTGTAAAGACCTTCATCTCTTGCCCCCTCAGGTAGAAAATCCTATCTATGGCTGGTAA 2364 0.4488 MATQSQTSPSSNAFSFISKGWRDVRDSADADLQLMRDRANSFKKLATSFDRELENFFNSASPFSVPTMRASPQAEIDFVKKLQPKLSEIRRAYSSPDFSKKVLEKWRPRSRIRIDLSAIKNAIVSEVEDGDEILDFDRGKRARRLNFREFWGEWKREGEADGEGQSARDWEPIRALKTTLKEFEKRRSSVEIFDGFKNGEFVEKLKLGLKSMCMEPQESKEVPPLDVPELLASFVRQSEPFLDQLGVRREICDKIVESLYSKRKNQHFLQSLSGEESSALGNGNINDDLDLRIASVLQSTGHRYDGGLWAEHSKHDSSGTERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSAKQKVTLLVPWLCKSDQELVYPGNLTFSSPEEQEVYIRNWLEERIGFKPDFKVSFYPGKFSKERRSIIPAGDTSQFIPSKEADIAILEEPEHLNWYHHGRRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFLVKHINNWVTRAYCHKVLRLSAATQDLPKSEICNVHGVNPKFLKIGEKIAAERELGQKAFTKGAYFLGKMVWAKGYKELIDLLAKHKSDLDGFKLDVFGNGEDAHEVQSAARRLDLNLNFQKGRDHADDSLYGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNQFFMSFPNCLTYRTSEDFVAKVKEALANEPHPLTPEQRYQLSWEAATQRFMEYSELDKVLNGEKDGGKVVARSASMPNLTELVDGGLAFAHYCFTGNEFLRLCTGAIPGTRDYDKQHCKDLHLLPPQVENPIYGW 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3032 787 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic 522 680 - -
Prci1g3032 787 Gene3D Glycogen Phosphorylase B; 522 653 - -
Prci1g3032 787 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic-like 411 521 - -
Prci1g3032 787 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 324 704 - -
Prci1g3032 787 Pfam Glycosyl transferases group 1 549 653 IPR001296 GO:0016757
Prci1g3032 787 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 7 785 IPR044525 GO:0046481
Prci1g3032 787 Gene3D Glycogen Phosphorylase B; 412 521 - -
Prci1g3032 787 CDD Glycosyltransferase_GTB-type 452 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3032 Prci-Chr1 48905329 48910198 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3032 12 616 Glycosyltransferase AT3G11670 69.643 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3032 K09480 - gmx:100796354 1361.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3032 1 48905329 48910198 Prci1g3032 1 48905329 48910198 ECH