Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci1g3011 | ATGGCCTCCTCAACTGCCCCCGCTGCTATCCTTTCTTCAAACCCTACCCTCTTCTCTCCCAAATTATCCTCTCCCTCTCTCTCTTTCTCCCCTTCCTTCCCCAAGTCTTTCGTTGGCCTTCGCAAACCCTCACTCTCTGCTCGCCCTCATTCCTTTTCCTTGAATCGTGCCTCTCATTCTAGACGCAGCTTCGTCGTCAAAGCTTCTAGTGAACTTCCACTTGTTGGAAATAAAGCACCGGATTTTGAAGCGGAGGCTGTTTTTGACCAGGAGTTTATCAAGGTTAAACTTTCTGATTACATTGGAAAGAAATATGTCATCCTCTTCTTCTACCCCTTGGACTTCACATTCGTTTGTCCAACAGAAATCACTGCCTTCAGTGATCGGCATGCAGAATTTGAGGCACTAAATACTGAGATATTGGGTGTTTCAGTTGACAGCGTGTTCTCGCATCTTGCATGGGTTCAAACGGATAGAAAGTCTGGTGGTCTTGGGGACTTGAAGTATCCACTGATTTCCGATGTCACCAAATCAATTTCAAAATCTTATGGTGTGCTGATTCCTGATCAGGGGATTGCGTTGAGAGGATTGTTCATTATCGACAAGGAAGGCATTATCCAGCATTCTACCATTAACAACCTGGCAATTGGTAGAAGTGTTGATGAGACGAAGAGAACACTACAGGCCCTGCAGTATGTGCAGGAGAACCCAGATGAAGTTTGCCCTGCTGGGTGGAAGCCCGGTGAGAAGTCCATGAAGCCAGACCCTAAACTTAGCAAGGAGTACTTCGCAGCAGTGTAG | 801 | 0.4657 | MASSTAPAAILSSNPTLFSPKLSSPSLSFSPSFPKSFVGLRKPSLSARPHSFSLNRASHSRRSFVVKASSELPLVGNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFEALNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSYGVLIPDQGIALRGLFIIDKEGIIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFAAV | 266 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci1g3011 | 266 | Gene3D | Glutaredoxin | 67 | 266 | - | - | |
| Prci1g3011 | 266 | Pfam | AhpC/TSA family | 75 | 208 | IPR000866 | GO:0016209|GO:0016491 | |
| Prci1g3011 | 266 | Pfam | C-terminal domain of 1-Cys peroxiredoxin | 229 | 263 | IPR019479 | GO:0051920 | |
| Prci1g3011 | 266 | SUPERFAMILY | Thioredoxin-like | 73 | 264 | IPR036249 | - | |
| Prci1g3011 | 266 | FunFam | 2-Cys peroxiredoxin BAS1, chloroplastic | 67 | 266 | - | - | |
| Prci1g3011 | 266 | ProSiteProfiles | Thioredoxin domain profile. | 73 | 232 | IPR013766 | - | |
| Prci1g3011 | 266 | CDD | PRX_Typ2cys | 75 | 248 | - | - | |
| Prci1g3011 | 266 | PANTHER | THIOREDOXIN PEROXIDASE | 67 | 265 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci1g3011 | Prci-Chr1 | 48737868 | 48740958 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci1g3011 | K03386 | - | cave:132192196 | 439.884 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Prci1g3011 | 1 | 48737868 | 48740958 | Prci1g3011 | 1 | 48737868 | 48740958 | ECH |