Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3005 ATGATTGAATGCGCGAACCATGAAGAGACTCGTATTCATACAATTAAAGAAACGGAAGACCTCGTCGCCTCCTTTCCAAGGAACTTCAGATTGCTGGAGGAACTTGAACGGGGAGAAAAAGGTATTGGAGATGGCACAGTTAGCTATGGAATGGACGATGGTGATGACATATACATGCGCTCTTGGACTGGCACCATTATTGGTCCCCATAATACTGTACATGAAGGACGGATTTATCAATTGAAGCTCTTTTGTGATAAAGATTACCCAGAGAAGCCCCCAAGTGTTCGATTTCATTCACGGATTAATATGACCTGTGTTAATCATGAAACTGGAGTGGTTGAACCAAAGAAGTTCGGTGTTCTTGCAAACTGGCAACGAGAGTACACCATGGAGGATATACTGACCCAGCTGAAAAAAGAAATGGCTGCTCCACAAAACCGGAAGCTTGTCCAGCCTCCAGAAGGTACCTACTTTTAG 480 0.4396 MIECANHEETRIHTIKETEDLVASFPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGVLANWQREYTMEDILTQLKKEMAAPQNRKLVQPPEGTYF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3005 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 59 147 - -
Prci1g3005 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 26 159 IPR000608 -
Prci1g3005 159 Gene3D Ubiquitin Conjugating Enzyme 12 159 IPR016135 -
Prci1g3005 159 SMART ubc_7 29 157 - -
Prci1g3005 159 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 17 159 - -
Prci1g3005 159 Pfam Ubiquitin-conjugating enzyme 56 149 IPR000608 -
Prci1g3005 159 SUPERFAMILY UBC-like 24 159 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3005 Prci-Chr1 48698357 48701258 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3005 K10704 - vvi:100244148 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3005 1 48698357 48701258 Prci1g3005 1 48698357 48701258 ECH