Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2896 ATGGGGGCCTCGCTATCCAGCCTTGGGACGAATGGCTCGACCATTGGTCCGGGCCTTGGGGACATCCCGGAGAGCTGCGTGGCTTGCGTTTTCTTATATTTGACTCCGCCGGAAATATGCAATTTGGCGCGGCTCAATCGAGCTTTCCGCGGTGCGGCGTCCTCTGATGCAGTGTGGGAAACAAAGTTGCCCTCGAATTACCAAGATCTGCTCAATTTAATGCCTCCCGAGAGGTACCAGAATTTGTCCAAGAAGGATATATTTGCTCTGCTATCTCGACCAATACCATTTGATGATGGCAATAAGGAAGTATGGCTGGACAAGGTGACGGGAAGGGTTTGCATGTCCATATCGGCAAAAGCCATGGCGATTACTGGAATTGATGATCGGAGATACTGGAATTGGATTTCTACTGAGGAATCTAGGTTTCATACTGTGGCTTATTTGCTACAAATTTGGTGGTTTGAAGTTGATGGAGAGGTGAAATTTCCTTTTGCTGCCGATACTTACACTCTCTTCTTTAGGCTCCACCTTGGACGATTTTCCAAAAGGCTTGGCCGGCGTGTGTGCTATTATGAACACACGCATGGTTGGGATATAAAACCAGTGAGATTTGAGTTATCTACTTCAGATGATCAGCAAGCATCATTTGAGTGCTGTTTAGATGAAACTGAGCGAGATGATGCTTATGGTAACCATAAGCGTGGAAACTGGGTTGATTACAAGGTAGGGGAATTTAACGTCAGCGGATCGGAGCATATAACAGAAGTTAGATTCTCTATGAAACAGATCGATTGTACACATTCCAAAGGTGGGCTTTGTGTAGATTCTGTATTCATTATACCCAGTGATTTGAAATGGCGGAAGACAAGAGGCGTTTTGAAGTAG 888 0.4561 MGASLSSLGTNGSTIGPGLGDIPESCVACVFLYLTPPEICNLARLNRAFRGAASSDAVWETKLPSNYQDLLNLMPPERYQNLSKKDIFALLSRPIPFDDGNKEVWLDKVTGRVCMSISAKAMAITGIDDRRYWNWISTEESRFHTVAYLLQIWWFEVDGEVKFPFAADTYTLFFRLHLGRFSKRLGRRVCYYEHTHGWDIKPVRFELSTSDDQQASFECCLDETERDDAYGNHKRGNWVDYKVGEFNVSGSEHITEVRFSMKQIDCTHSKGGLCVDSVFIIPSDLKWRKTRGVLK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2896 295 PANTHER F-BOX PROTEIN PP2-A15 6 288 - -
Prci1g2896 295 SMART fbox_2 22 62 IPR001810 GO:0005515
Prci1g2896 295 SUPERFAMILY F-box domain 17 88 IPR036047 GO:0005515
Prci1g2896 295 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Prci1g2896 295 Pfam Phloem protein 2 113 282 IPR025886 -
Prci1g2896 295 CDD F-box_AtSKIP3-like 19 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2896 Prci-Chr1 47646443 47655780 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2896 - - pvy:116140156 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2896 1 47646443 47655780 Prci3g2923 3 40889199 40893049 CCT
Prci1g2896 1 47646443 47655780 Prci1g2896 1 47646443 47655780 ECH