Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2881 ATGAAGGTTTTAGACAAGAACTTGGCTCTGAACCAGCCGGGAACGGTCAAGATCATCCCGGAAGAACCCGACGACTTATGGGTGGTTTACAACCTAATTGCCAACGGAGACGTCGTCACCGCTGATACGACTCGCAAAGTTCACCTGGAGTCCACCAAGAACACCGCCTCACGCGTCAAGCTTACCATCCCCGTCAAAGTCAAGTGCCGCGACTTCCACAGAGATTCTTCCACCGTGCGCGTTCAAGGCAGGAACGTCGAGGCTAGCCAGTACGTCGCCGCCGGCTCATTCCACACGTTGACCCTCGAAAAGAACAGAGGCTTCGAACTCTCCAAAAAGATTTGGGATGCGACCGCTGTGGCAGCACTATCCGAGAGCTCCGAGAAATCATCAGGCGCTGACCTCGCCGTGATTCTTATACAGGAGGGTCAGGCAGAGGTTTATTTAGTTGGGAATGGGCTAACCACACTATGCTCTAAAATCGAAGCCTCGAAAACCAGAAAGAAATCAGCCAGCAGTGCGTTTTTCCAGGACACCTTTAATGCCTTTGTGAAGTATGTGGATTTCAACACCATTAAAAGCGTAATGATAGCGAGTGCTGGATCGACGAAGGACGAGTTCCGGAGGTTTCTGCTCTCAGAAGCCAAGAGATTGAAGATAAAGACAATCGAGGACAATAAGTCGAGAATTGTAGCGGCCGGATGTAAGGGAGATCTGAAGGAGGTTCTGCACGACAATGGGGTGATGAATATGATAAAAGATAGCAAGGTTGCGTTGGAGATTCGAGCTTTCCGAGAGTTGTGGGACTTGCTGGACAGCAATTCGGGCCGGGCGTGTTATGGTACGAAGAATGTGGAGGCTGCGCAGGAGATGATGGCAATTGAGACGCTACTGATCACGGACGATCTGCATAGAAGCTCAGATGTTCAGACGAGGCAGAAGTATACGAACTTGGCTAAATCGGTGAGAGAAGGGGGAGGCAAGGTTCTAGTTTATTCCTCCCTGCATGCCTCAGCACAACAGCTTGCCATGCTCACCGGAGTAGCCGCTCTTCTCAGGTTTCCGTTACCTGACCTTGATGACGTAGATGTTTAA 1095 0.5059 MKVLDKNLALNQPGTVKIIPEEPDDLWVVYNLIANGDVVTADTTRKVHLESTKNTASRVKLTIPVKVKCRDFHRDSSTVRVQGRNVEASQYVAAGSFHTLTLEKNRGFELSKKIWDATAVAALSESSEKSSGADLAVILIQEGQAEVYLVGNGLTTLCSKIEASKTRKKSASSAFFQDTFNAFVKYVDFNTIKSVMIASAGSTKDEFRRFLLSEAKRLKIKTIEDNKSRIVAAGCKGDLKEVLHDNGVMNMIKDSKVALEIRAFRELWDLLDSNSGRACYGTKNVEAAQEMMAIETLLITDDLHRSSDVQTRQKYTNLAKSVREGGGKVLVYSSLHASAQQLAMLTGVAALLRFPLPDLDDVDV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2881 364 Gene3D Pelota, domain A 1 129 IPR038069 -
Prci1g2881 364 SMART eRF1_1_2 1 128 IPR005140 -
Prci1g2881 364 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 126 IPR038069 -
Prci1g2881 364 Gene3D eRF1 domain 2 133 252 IPR042226 -
Prci1g2881 364 SUPERFAMILY Translational machinery components 131 256 - -
Prci1g2881 364 FunFam Protein pelota homolog 256 364 - -
Prci1g2881 364 Gene3D - 254 364 IPR029064 -
Prci1g2881 364 PANTHER PELOTA 1 363 IPR004405 GO:0070481|GO:0070966|GO:0071025
Prci1g2881 364 Pfam eRF1 domain 3 260 356 IPR005142 -
Prci1g2881 364 FunFam Protein pelota homolog 1 129 - -
Prci1g2881 364 Pfam eRF1 domain 2 135 254 IPR005141 -
Prci1g2881 364 SUPERFAMILY L30e-like 250 356 IPR029064 -
Prci1g2881 364 Pfam eRF1 domain 1 1 126 IPR005140 -
Prci1g2881 364 NCBIfam mRNA surveillance protein pelota 11 356 IPR004405 GO:0070481|GO:0070966|GO:0071025
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2881 Prci-Chr1 47524274 47525747 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2881 K06965 - gmx:100803618 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2881 1 47524274 47525747 Prci1g2881 1 47524274 47525747 ECH