Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2827 ATGCCGGATTCTTACGATTTCTCCCAGTACGAGGATGTTGAAGTATTAGCGGCACAAATATCTGAAAACGAAGGGGAATCTACTGCCAGCGGAGAAGTAGAGGACGATGATGACGAGGAGGACGAGGACGAGGACGATGATGAAGACGAGGCCGAAGAGTATATCCCACTTGTACAGTCTCCTAGGGCATCACAGGGCGTTTCTTCTGCCTCCAATCAACATGATACCATAATTCAGGTTCCGGACGATTGCGTTGAAGAAGAGGGAAACAAACGGCGGAGGACTGAAGGAGGAGAAACGTGTTCCTCTTTGATAACCGGGAGCGCCAACAGTACTAAAGGGAATGAGTGGAACCGTGCTGACATTGATGGCTTGTTTTGCCCCATTTGCATGGATGCTTGGACCAATGACGGCGAACATCATATCTGCTGTCTTCCGTGTGGGCACATGTATGGTATGTCTTGCATCAAAAGATGGCTTCAACAACGAAAAAATTCTGGGAAGTGTCCACAATGCAACAGGAAATGTGCATTGAGGGATGTGAGGAAACTCTATGCTTCACGTGTACTTGCTGCTGATGAAGAGTCGCAGAAGAAAATTCGGTCGCTTGAGGCTAGATGTGCTATTCTTGAACGCAAGGGCTCGGACTGGTACAAGAAAGAAGCAGCATGGCAGAAAAAAGAAGCTCAATTGCATCTTGAAGTTAAGAAACTTACGGAGAGAAATGCATATTTGGAGCAGCTGATACAAGATATGGATAGAAGACAAACTAGTGCCATGGGGGCAATTGGGAATTGTCGATGGAGATCTGAATCAAAACATGGCTTTGGCGCAAAAATATATGGGAAAGGACATTGTTGCAATTTTGAATTGCAGAGAGAGTTTCAGCTGACCAGCGCACTTGTATTTGACGTAAATGCTTCTAATCAAATTTTGTTAATAGCACAAAGGCCAAAAGGGATAGGTGGACCTTACTTGCTAACTAAAATGAGCTTGATACCTCCCTATGAGATGGAAGATATCTTGCTGCCTTCTGCTTCATGTGCTATTAAAGATCTCCATATTTCCCCTTTGAACAGTGACCTGGCCCTTTATGCTTCATTAGGAAGGAAATTATCGGTACTCAGCATGGAGAGCAACAATGTTGTTGTTAATTATGATCTACAGGTTCCTGCTTGGTCATGTTCATGGGATCGCAGTAGTTCCCATTATGTATACGCTGGACTACAGAATGGTTCTGTCTTGGAATTTGATTTGCGCCAAACTGCTGGCCCCATAAAATCCCAAAATGGGTTAACGAGCAACCCTGTTCATACTGTACAGTCTCTTGTACAAGATTCCAGTTTTCCTTCAGGTGTTAGAACAATTCTATCGGCTTCTGCGATTGGCCTGTGTCAGTGGAACATAGGCGCTGAAGAGAGGCCATGTATGATTCCTGAAACTGGTAATCAAGGTGTTTGTATATCTCTTGCCTATTGCCCAAGCAGTGATGATGTTGTCATATCATACCGTCCCAAATTTGACATGTCCATTGATGGGTCTCTCTCTCAACCATCTCTCACTCCTTCCCAAGTTAAAGGACAGGGAGTCCAGGGCTCTCATGTTTTGTTCAAGAGACATGGTGGAAACCACTTTCAGCAGTTGGGTTCCTCATGTGCCAATGTAAGTAACATTCGACTTCCAAAATGTGTAATAATGGATATAGAGAGTGAGAGCCGATTGTTAGCAACTGGAGATGAACGTTCGTGTGAATTGGTCTTGCAAGAGTTGCCATCTTTTGGGGTTCTTCAGCGTTTGAAATTACCAGAGCATGCACGGGATCTGAAGTATTCACCTAATCATGGATTACTGGGGTGTTTAACTGGAAATTCATTGCAACTTTTCTGCACCAAACTCTCGTGA 1902 0.4427 MPDSYDFSQYEDVEVLAAQISENEGESTASGEVEDDDDEEDEDEDDDEDEAEEYIPLVQSPRASQGVSSASNQHDTIIQVPDDCVEEEGNKRRRTEGGETCSSLITGSANSTKGNEWNRADIDGLFCPICMDAWTNDGEHHICCLPCGHMYGMSCIKRWLQQRKNSGKCPQCNRKCALRDVRKLYASRVLAADEESQKKIRSLEARCAILERKGSDWYKKEAAWQKKEAQLHLEVKKLTERNAYLEQLIQDMDRRQTSAMGAIGNCRWRSESKHGFGAKIYGKGHCCNFELQREFQLTSALVFDVNASNQILLIAQRPKGIGGPYLLTKMSLIPPYEMEDILLPSASCAIKDLHISPLNSDLALYASLGRKLSVLSMESNNVVVNYDLQVPAWSCSWDRSSSHYVYAGLQNGSVLEFDLRQTAGPIKSQNGLTSNPVHTVQSLVQDSSFPSGVRTILSASAIGLCQWNIGAEERPCMIPETGNQGVCISLAYCPSSDDVVISYRPKFDMSIDGSLSQPSLTPSQVKGQGVQGSHVLFKRHGGNHFQQLGSSCANVSNIRLPKCVIMDIESESRLLATGDERSCELVLQELPSFGVLQRLKLPEHARDLKYSPNHGLLGCLTGNSLQLFCTKLS 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2827 633 MobiDBLite consensus disorder prediction 80 98 - -
Prci1g2827 633 Gene3D - 339 515 IPR015943 GO:0005515
Prci1g2827 633 Pfam Ring finger domain 127 173 IPR001841 -
Prci1g2827 633 SUPERFAMILY WD40 repeat-like 347 628 IPR036322 GO:0005515
Prci1g2827 633 ProSiteProfiles Zinc finger RING-type profile. 127 173 IPR001841 -
Prci1g2827 633 Coils Coil 235 255 - -
Prci1g2827 633 MobiDBLite consensus disorder prediction 1 107 - -
Prci1g2827 633 CDD mRING-C3HGC3_RFWD3 123 185 - -
Prci1g2827 633 SMART ring_2 127 172 IPR001841 -
Prci1g2827 633 MobiDBLite consensus disorder prediction 28 54 - -
Prci1g2827 633 SUPERFAMILY RING/U-box 119 177 - -
Prci1g2827 633 Coils Coil 193 213 - -
Prci1g2827 633 PANTHER RFWD3 PROTEIN 21 631 IPR037381 GO:0004842|GO:0005634|GO:0016567|GO:0036297
Prci1g2827 633 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 250 IPR013083 -
Prci1g2827 633 MobiDBLite consensus disorder prediction 61 78 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2827 K15691 - qsa:O6P43_006620 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2827 1 47046324 47051494 Prci1g2827 1 47046324 47051494 ECH