Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2738 ATGGCTTCTGTAGAAAGATCAAAGAAGAAATCCCAGATATGGAAGAAAGGCATGATTCATTTTTCTGTGTGTTTCGCAATGGGTTTTTTCACAGGCTTGGCTCCTACAGGCAAGTCTTCAACGTTCTCTTCCCCATCACTTGCTACCTCCAATAGAGAATTCGCTCCACAGCCTATGCCAGTGGGCCACCAGACAGTAATTAATGCCAATACAAGTTCGATCGCTCCAGAGAAGGAAGGCCAGCCAATGATGTCCAGGTTCCCCAAACACAAAAAGAATCCGCGAGAAAAACCAGAACCCGAGTTGAGACCTCGTAAACCGGTGATTATTGTGACCCCGACGAGCAATAAACTTCGGTTTCAGGGGGTGTATCTGGGTAAGTTGGCCAACACTATAAAGCTGGTTCCTCCGCCATTGTTGTGGATTGTGGTGGAACCACAAACGGAGTCCACAGAACTGCCGGAGATACTGAGGACGACTGGCATCATGTACAGACATTTGGTTTCTAAGGAAAACTTCACTGACTTGGAAGCTGAACTCAATCACCAGAGGAATCTCGCTCTCAAGCACATTGAGCATCACAGGCTGAGTGGGATCGTCCACTTTGCTGGGCTTTCCAATGTTTATGACCTGGAATTCTTCCACCAACTCAGAGATATTGAGGTGTTTGGGACATGGCCAATGGCAATGCTAAGAGCAAATAGGAAGAAAGTGAAGATGGAAGGACCTGTGTGCAATTCTTCACAAGTAATAGGATGGCATCTGAGGAAAAGGAACAATGAAACGGACATGTTGAGTTCTCAAATTCGTATTTCGAGTTTAGCCTTCAATAGTTCGATCCTCTGGGATCCTGAGAGATGGGGTCGCGATTCGCCTGTTCAAGACACCTCTCAGAATTCAATAAAGTTCGTGAAGCAAGTAATTCTGGAAGACGAGTCCAAGTTGAAGGGAATTCCAGCAGACGATTGCTCCAAGATTTTGCTCTGGCGTTTTAATTTCCATACCCAACCCACTCTAAAACGTCAAGTTTTGAGAATTTCATTATAA 1047 0.4527 MASVERSKKKSQIWKKGMIHFSVCFAMGFFTGLAPTGKSSTFSSPSLATSNREFAPQPMPVGHQTVINANTSSIAPEKEGQPMMSRFPKHKKNPREKPEPELRPRKPVIIVTPTSNKLRFQGVYLGKLANTIKLVPPPLLWIVVEPQTESTELPEILRTTGIMYRHLVSKENFTDLEAELNHQRNLALKHIEHHRLSGIVHFAGLSNVYDLEFFHQLRDIEVFGTWPMAMLRANRKKVKMEGPVCNSSQVIGWHLRKRNNETDMLSSQIRISSLAFNSSILWDPERWGRDSPVQDTSQNSIKFVKQVILEDESKLKGIPADDCSKILLWRFNFHTQPTLKRQVLRISL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2738 348 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 106 346 IPR029044 -
Prci1g2738 348 FunFam Glycosyltransferases 106 345 - -
Prci1g2738 348 CDD GlcAT-I 106 336 IPR005027 GO:0015018|GO:0016020
Prci1g2738 348 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 12 336 IPR005027 GO:0015018|GO:0016020
Prci1g2738 348 Pfam Glycosyltransferase family 43 128 332 IPR005027 GO:0015018|GO:0016020
Prci1g2738 348 MobiDBLite consensus disorder prediction 75 103 - -
Prci1g2738 348 SUPERFAMILY Nucleotide-diphospho-sugar transferases 107 337 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2738 Prci-Chr1 46493602 46495825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2738 1 339 Glycosyltransferase AT2G37090 57.584 5.19e-141 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2738 K20869 - gmx:100785607 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2738 1 46493602 46495825 Prci3g3051 3 41948998 41951122 CCT
Prci1g2738 1 46493602 46495825 Prci1g2738 1 46493602 46495825 ECH