Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2676 ATGAAGAAACAATTGACAGGTATACGGGACGATAACCCCCTGCAGTCAGCTATCCGAGCAGGAAATGTAGAATTGGCATTGAAAATTATTTCTGAGAATGGAGATACAGAATTGAAGGAGTTGCTTTCGAAGCAAAATCACTCTGGTGAAACTTCCCTTTACGTTGCTGCTGAAAATGGCCATGTTGATTTAATGAAGGAATTGATCCACTATCATGATATTGGCATGGCCAGTGTCAAAGCAAGAAATGGTTTCGATGCATTCCATATTGCTGCTAAAAATGGGTACCTGGAGATATTGATGGTCCTGAAGGATGCGATTCCAGAACTTTCACTGACTGTTGACATGTCAAACACTACAGCATTGCACACTGCTGCAGCACAAGGACATATCGAGATAGTAAACTTTCTCTTGGACAAAGGTAGCAATCTGATCACTATTTCAAAAAGCAATGGGAAAACTGCGTTGCATTCTGCTGCAAGAAATGGGCATGTGGAGGTCGTCAGGGCCCTTCTGAACAAAGAACCTGAAATTGCTATGAGAATTGATAAGAAGGGTCAGACAGCGCTCCACATGGCAGTTAAAGGACAAAATCTTGAGTTGGTGGTGGAAGAGCTTGTGAAATCATTTCCATCTTTGACTAACACAGTTGATGCCAAGGGAAACACTGCACTGCATATCGCCACTCGGAAGGGTCGTCTACAGATTGTTGGGAAGCTACTAGAGAACAGAGGAACAGACACAGATGTCATCAACAAATCTGGAGAAACTGCTCTGGACATTGCGGAGAAAAATAAACACTCGGACATTGTCAGCATTCTTCAAGATCATGGAGCTCAGAGTGCCAAGTCCATGAATTCACATTCTACAAACCCTGCCCTTGAACTCAAACGCACAGTGAGTGATATAAAAAGCGGGGTTCATAACCAGCTAGAGCACACAATCAGAACACGAAAGCGCATGCAAGGCATAGCGAAACGACTCAACAAAATGCAAGCTGAGGGGCTTAATAATGCAATCAACTCCAACACTGTCGTTGCTGTTCTTATTGCAACGGTTGCTTTTGCTGCTATATTCAACATTCCAGGCCAGTATCCTGACCTCCAAAACGGAAAAGCACTTCCACCTGGAATGTCTGTTGGGGAAGCATATATTGCTCCACAAATGGGATTTTTGATTTTCATCATCTTTGATTCTACTGCCCTCTTTATATCCTTGGCTGTTGTGGTTGTGCAAACATCAGTTGTGGTTATTGAGAGGGAAGCAAAGAAACAAATGACGGCGGTTATAAACAAGTTAATGTGGCTGGCTTGTGTGCTAATATCTGTGGCATTCATTGCAATGTCATACATAGTTGTGGGGAAGCATAAATGGTTGGCCATTGCAGCAACGGTTTTAGGGACGGTGATCATGGCAGCTACACTAGGAACTCTATGTTATTGGGTGATTGCTCACCGGCTTGAGGCCTCCAGATTGCGGAGTCTTAGGAGGTCAACCATGAGCAGTAGACAGTCTCTGTCTATGTCTATGATGTCGAATTCGGAGAGTGAATACAAGACTGTGTATGCAATATAA 1575 0.4343 MKKQLTGIRDDNPLQSAIRAGNVELALKIISENGDTELKELLSKQNHSGETSLYVAAENGHVDLMKELIHYHDIGMASVKARNGFDAFHIAAKNGYLEILMVLKDAIPELSLTVDMSNTTALHTAAAQGHIEIVNFLLDKGSNLITISKSNGKTALHSAARNGHVEVVRALLNKEPEIAMRIDKKGQTALHMAVKGQNLELVVEELVKSFPSLTNTVDAKGNTALHIATRKGRLQIVGKLLENRGTDTDVINKSGETALDIAEKNKHSDIVSILQDHGAQSAKSMNSHSTNPALELKRTVSDIKSGVHNQLEHTIRTRKRMQGIAKRLNKMQAEGLNNAINSNTVVAVLIATVAFAAIFNIPGQYPDLQNGKALPPGMSVGEAYIAPQMGFLIFIIFDSTALFISLAVVVVQTSVVVIEREAKKQMTAVINKLMWLACVLISVAFIAMSYIVVGKHKWLAIAATVLGTVIMAATLGTLCYWVIAHRLEASRLRSLRRSTMSSRQSLSMSMMSNSESEYKTVYAI 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2676 524 SMART ANK_2a 254 287 IPR002110 GO:0005515
Prci1g2676 524 SMART ANK_2a 220 250 IPR002110 GO:0005515
Prci1g2676 524 SMART ANK_2a 83 112 IPR002110 GO:0005515
Prci1g2676 524 SMART ANK_2a 151 180 IPR002110 GO:0005515
Prci1g2676 524 SMART ANK_2a 48 76 IPR002110 GO:0005515
Prci1g2676 524 SMART ANK_2a 9 38 IPR002110 GO:0005515
Prci1g2676 524 SMART ANK_2a 117 147 IPR002110 GO:0005515
Prci1g2676 524 SMART ANK_2a 185 215 IPR002110 GO:0005515
Prci1g2676 524 ProSiteProfiles Ankyrin repeat region circular profile. 48 69 - -
Prci1g2676 524 Gene3D - 1 146 IPR036770 -
Prci1g2676 524 ProSiteProfiles Ankyrin repeat region circular profile. 117 144 - -
Prci1g2676 524 ProSiteProfiles Ankyrin repeat profile. 48 69 IPR002110 GO:0005515
Prci1g2676 524 PRINTS Ankyrin repeat signature 152 167 IPR002110 GO:0005515
Prci1g2676 524 PRINTS Ankyrin repeat signature 270 284 IPR002110 GO:0005515
Prci1g2676 524 ProSiteProfiles Ankyrin repeat profile. 185 208 IPR002110 GO:0005515
Prci1g2676 524 Pfam Domain of unknown function 334 452 IPR026961 -
Prci1g2676 524 Gene3D - 147 338 IPR036770 -
Prci1g2676 524 ProSiteProfiles Ankyrin repeat region circular profile. 151 178 - -
Prci1g2676 524 ProSiteProfiles Ankyrin repeat profile. 220 253 IPR002110 GO:0005515
Prci1g2676 524 ProSiteProfiles Ankyrin repeat profile. 151 183 IPR002110 GO:0005515
Prci1g2676 524 ProSiteProfiles Ankyrin repeat region circular profile. 220 253 - -
Prci1g2676 524 Pfam Ankyrin repeats (3 copies) 204 280 IPR002110 GO:0005515
Prci1g2676 524 ProSiteProfiles Ankyrin repeat profile. 117 149 IPR002110 GO:0005515
Prci1g2676 524 Pfam Ankyrin repeats (many copies) 118 172 IPR002110 GO:0005515
Prci1g2676 524 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 9 505 - -
Prci1g2676 524 ProSiteProfiles Ankyrin repeat region circular profile. 185 208 - -
Prci1g2676 524 SUPERFAMILY Ankyrin repeat 13 279 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2676 Prci-Chr1 46142596 46145932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2676 1 524 Miscellaneous Gene Families AT1G07710 63.327 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2676 - - gmx:100787392 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2676 1 46142596 46145932 Prci1g2676 1 46142596 46145932 ECH