Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2659 ATGCAGGGAACGTGCTTGCCCGGAGGACAGTGGCCCCGCGGCAAATGGCTTTCCATTATTCGTCAAGCCTTGGACACTGAGAGGTTTGACCAAGACCTCCATCACGAGAATTCTCGCCCTCATTCTCGGAATTGCAACGACAAGGGCGCCGATCAACTAGGAAGAACGAAGCCGAGGTTCAGTTTCTCGGACTTTCTTTCTTCAGAGGACCAGCTGGGCGCTGAAGAATTTGCTGAATTGTCTCGTGACAAATCAAATGCCAGTTGTGGCGGTGAAACTGAAAACTCTCCTTCGCCTTCTACGAGTGGCAGACATTGTAGCAGTAGCCCACATCTTAAACGACGCTATTGCCTAGCAGCAAGCAAACAAATGGTCGGTATCTTCCTGTGCGTGTGGGTTCGTTCCGACCTCTACGGACACCTTTCCAATTTGAAGGTGTCCTGCGTCGGTAGGGGCATCATGGGCTATCTTGGGAATAAGGGCTCTATATCAATTAGCATGACATTGTACCACACATCCTTCTGTTTCGTATGCACCCACTTAACTTCGGGAGAGAGAGACGGCGATGAGGTGCGAAGAAACTTCGATGTCTCCGAAATGAAGAGAACTAAATTTTCCCACCCTTCGAATTATAGGGATCTTCGACTCCCTCCTGAGACCATCTTGCAACACGACAATATTGTTTGGCTTGGGGATTTGAATTATCGGTTAGCTTCTGGTTATGACTATACATGTGAGCTATTGGAGAAGAGCGATTGGCTGGCACTTTTAGAGAAGGATCAGCTAAGGATAGAGCAGAGAGCTGGTCGTGTATTTGAAGGGTGGAATGAAGGAACGATATCTTTCGCTCCTACTTACAAATACCTGGCCAATTCAGATCGCTATGTCGTCCATACTTCCAAATCCAAGGAAAAACGTCGCACTCCTGCTTGGTGCGATAGAATCCTATGGAAAGGAGAAGGCCTGAAGCAGATGTGGTACGTGCGAGGAGAGTCAAAATTCTCAGACCACAGGCCAGTGTATTCACTCTTCTCAATTAAAGTGGACTTAACGAGCAAGAAGATAATTCCTGCTGCTTCAGCCTTGTCATCGACTTGCCCAGCCAAGGTTCAAGTAGAGGAACAGCTCATGTTGCTAACACGGGCAAATAGTTGA 1155 0.4788 MQGTCLPGGQWPRGKWLSIIRQALDTERFDQDLHHENSRPHSRNCNDKGADQLGRTKPRFSFSDFLSSEDQLGAEEFAELSRDKSNASCGGETENSPSPSTSGRHCSSSPHLKRRYCLAASKQMVGIFLCVWVRSDLYGHLSNLKVSCVGRGIMGYLGNKGSISISMTLYHTSFCFVCTHLTSGERDGDEVRRNFDVSEIXKRTKFSHPSNYRDLRLPPETILQHDNIVWLGDLNYRLASGYDYTCELLEKSDWLALLEKDQLRIEQRAGRVFEGWNEGTISFAPTYKYLANSDRYVVHTSKSKEKRRTPAWCDRILWKGEGLKQMWYVRGESKFSDHRPVYSLFSIKVDLTSKKIIPXAASALSSTCPAKVQVEEQLMLLTRANS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2659 386 SMART i5p_5 53 353 IPR000300 GO:0016791|GO:0046856
Prci1g2659 386 MobiDBLite consensus disorder prediction 85 106 - -
Prci1g2659 386 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 12 363 IPR045849 GO:0004445
Prci1g2659 386 Gene3D Endonuclease/exonuclease/phosphatase 44 374 IPR036691 -
Prci1g2659 386 MobiDBLite consensus disorder prediction 31 56 - -
Prci1g2659 386 MobiDBLite consensus disorder prediction 31 54 - -
Prci1g2659 386 Pfam Endonuclease/Exonuclease/phosphatase family 105 338 IPR005135 GO:0003824
Prci1g2659 386 MobiDBLite consensus disorder prediction 86 106 - -
Prci1g2659 386 SUPERFAMILY DNase I-like 114 353 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2659 Prci-Chr1 45981229 45984530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2659 116 349 Acyl Lipid Metabolism Gene Families AT1G65580 32.028 6.56e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2659 - - pcin:129298224 763.837