Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2598 ATGGCCGGAGATTCCAATTCTAACCCTAAAATCATCGTCGAGAGAAATCCTCCTCAGTCACGCCTTGCCAGTCTAAACGTCACCTGCTGGCCCAAAAGATGGGGTTGTTCACCAGGGAAGTACCAGTTGAAGTTTGATGCAGAAGAAACCTGCTATCTGCTGAAAGGGAAGGTCAAGGCTTACCCAAAAGGTTCATCGGAGTTTGTGGAGTTCGGTGCCGGAGACCTCGTGATTATCCCTAAAGGTCTCAGTTGCACTTGGGATGTATCTCTCGCCGTCGATAAATACTACAAATTCGAGTCGTCTTCTTCTTCTTCATCCTCATCATCATCATCTTCTGCAGCTTCTTAA 351 0.4701 MAGDSNSNPKIIVERNPPQSRLASLNVTCWPKRWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSEFVEFGAGDLVIIPKGLSCTWDVSLAVDKYYKFESSSSSSSSSSSSSAAS 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2598 116 CDD cupin_TM1112-like 30 99 - -
Prci1g2598 116 Gene3D Jelly Rolls 3 99 IPR014710 -
Prci1g2598 116 Pfam EutQ-like cupin domain 30 97 IPR008579 -
Prci1g2598 116 SUPERFAMILY RmlC-like cupins 32 90 IPR011051 -
Prci1g2598 116 PANTHER OS04G0445200 PROTEIN 8 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2598 Prci-Chr1 45563649 45564647 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2598 - - gmx:100793722 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2598 1 45563649 45564647 Prci1g2598 1 45563649 45564647 ECH