Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2547 ATGGCGATGGCTGGGCTGTACAGGCGGTTACTTCCTTCTCCGCCTGCAGTAGAATTCGCTTCATCCGAAGGAAAGCAACTTTTTGTTGAAGCCATTCAAAATGGAACAATGGAAGGCTTTTTTAGATTAATTTCTTATTTTCAAACACAATCAGAGCCTGCATACTGTGGATTGGCAAGCTTATCCATGGTCTTGAATGCTCTTGCTATTGATCCTGGAAGAACATGGAAAGGTCCTCGGAGATGGTTTGATGAATCTATGTTGGACTGTTGTGAACCTCTGGAGAGGGTCAAAGCCAGAGGTATCTCATTTGGGAGGCTTGTATGCTTGGCTCATTGTGCAGGAGCAAAAGTTGAAGCCTTTCGTGCAAATCAAAGCAACATTGATGACTTCCGTAAATATGTCAAGAGGTGTTCGACTTCTGATGATTGTCATATAATCTCTTCTTACCACAGAGCTGCTCTCCATCAAACCGGAACTGGTCATTTTTCTCCTATTGGTGGCTATCATGCTGGAAAGGATATGGCACTTATTCTGGATGTTGCACGTTTCAAGTATCCTCCTCATTGGGTCCCACTTGCCCTTCTCTGGGAAGGCATGAACTATGTTGTTGAAGACATTGGACAACCTAGGGGGTTCATGCTTATATCAAGGCCTCACAGGGACCCTGGTATGCTCTATACTCTGAGCTGCAAACATGAGAGTTGGATTAGTATCGCAAAATTCCTGATGGATGATGTTCCCCTGCTACTAAAATCAGAGGATGTGAAAAACGTTCACAAGGTTCTCTCAGTTGTAATCAATTCGCTTCCATCTAATTTTGGGGATTTTATTAAGTGGGTTGCAGAAGTCAGGAGGCGAGAGGATGGTGGTCCAAGTTTGAGTGCAGAGGAGAAAGCTAGGGTTTCTGTTAAGGCAGAAGTATTGAAACAGGTGCAGGAGACACAGCTTTTTAAACATGTCACTTCTTTTCTATCAAATTCTTGCTGCAAGCTGCCATCACTTTCAGGTCATGGAGACACCTTACCTAACATTGCAGCAAATGTTTGTTGCCAAGGAGCAGAAATTCTAGGTGGGAAGCTTAGCTCATCGGCAGTGTATTGCTGTAGAGAAACATGTATGGAATGCTTGAAAGCAGAGGGTGACAAGCCAATCACAATGGTTAGTGGGACTGTAGTAAACGGTAACAGTGAACAAGGGGTTGATGTTTTGTTTCCTTCTCAAGGACCATGTTGTGATTGCTCTGGCCTGAGTAAGTACATTGAGATGCACCCAACTAGCAGTGACGTGCTAACAGCACTGCTTCTCTCGTTACCATCTACAACATGGGCTGGTATCAAAGATGGGCAAGTTTTGAAGGAAATAGATGAACTTGTTTCAATTGATAACCTTCCTACGTTGCTGCAAGAAGAGGGAACTGTGAACGTTAGTCCTAGGAAGTGCTTAAGCAAGGACAATTTTGAGTTCAACAGATGCCTCGACTATTTTTCCTGCGCTGGTCCCCATTCAAAGTGTCCTATGAAGTAA 1527 0.4381 MAMAGLYRRLLPSPPAVEFASSEGKQLFVEAIQNGTMEGFFRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRTWKGPRRWFDESMLDCCEPLERVKARGISFGRLVCLAHCAGAKVEAFRANQSNIDDFRKYVKRCSTSDDCHIISSYHRAALHQTGTGHFSPIGGYHAGKDMALILDVARFKYPPHWVPLALLWEGMNYVVEDIGQPRGFMLISRPHRDPGMLYTLSCKHESWISIAKFLMDDVPLLLKSEDVKNVHKVLSVVINSLPSNFGDFIKWVAEVRRREDGGPSLSAEEKARVSVKAEVLKQVQETQLFKHVTSFLSNSCCKLPSLSGHGDTLPNIAANVCCQGAEILGGKLSSSAVYCCRETCMECLKAEGDKPITMVSGTVVNGNSEQGVDVLFPSQGPCCDCSGLSKYIEMHPTSSDVLTALLLSLPSTTWAGIKDGQVLKEIDELVSIDNLPTLLQEEGTVNVSPRKCLSKDNFEFNRCLDYFSCAGPHSKCPMK 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2547 508 Pfam Domain of unknown function (DUF1984) 231 471 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Prci1g2547 508 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Prci1g2547 508 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Prci1g2547 508 SUPERFAMILY Cysteine proteinases 13 217 IPR038765 -
Prci1g2547 508 Gene3D - 16 221 IPR038156 -
Prci1g2547 508 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 3 472 IPR040409 GO:0016756|GO:0046872|GO:0046938
Prci1g2547 508 FunFam Glutathione gamma-glutamylcysteinyltransferase 1 15 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2547 Prci-Chr1 45227572 45232222 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2547 K05941 - gmx:547627 773.467