Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2473 ATGGACAAGTTGAATCTAGCTCAATTGGGTGAGAAGCTGAAGACGAGTGGAGCTCAAATGGGTCGAATTGTTAGTGACAAAATGAAGGAAATTTTGCAAACCCCTACTCCTGAATCAAAGATGGTTGACGAAGCAACATCGGAGACCCTAGAGGAACCCAACTGGGGTATGAATTTGAGGATATGTGCAATGATCAATAGTGGAGAATTTAATGGATCCGAGATTGTGAAGGCCATAAAGAAGAAGATTTCAAGCAAGAACCCAGTGAGCCAGAGGCTGAGTCTTGACTTGCTGGAAGCCTGTACTATGAATTGTGAGAAAGTGTTTTCTGAGGTGGCATCAGAGAAGGTGCTTGAAGATATGGTTCGAATGATTGATAATCCACTAACAGATCATCAGAATAGAAGAAGGGCCTTGCAGTTGATCAGGGCTTGGGGAGAGTCAGGGGATCTTGCCTACCTACCGGTGTTTCGTCAAACCTATATGAGCCTGAAAGGAAGAAGTTTGCCTCTGGAGATAGATGGAGAAAATTCAGCGCATGTTCCATATTCCTTGGAGTCTCATGTACATGAAGATTCATTAGATCCTCCTGAAAGTTATCCTATTCCTGATGCTGCATTTCATGTGATGAATAGATCTGGTTTCTCTTCTAGTCCCAGAAGCCTATCGGTTGAAGAGAAAAAGGAGCATCTTGTCATTGCTCGAAACAGTCTTGAATTACTCTCTACCATATTAAATTCTGGAGCAGAGCCAAAATTGTTGAAGGAAGATGTGACTGTGAGCTTGTTGGAAAAGTGCAGGCAGTCACTATCTGTCATTAAGGTGATTGTTGAAAGCACCGCTGATGATGAGGGAACACTTTTTGAGGCTTTGAACCTTAATGATGAGCTACAACAAGTAGTTTCCAAGTACGAGGAGTCGGAAGCTGCCCAAGACTCTAGAGCACAACCATATGTAGCAGCTGATACCACGAAGCATGTTGCAGAAGCTGTTCAAAATCCCATCGGACCACCTGAAAGCGTTGAAGGTGATGAACCTCGTGAGTCAGATGCTGCTGATAGACTTCAGAGGAAGGTGTCCAATAAGCCCGACGCTTCTGAGGTCAATTCTACTACTGTTGTTTATAATCACTGTGAGGCCAACACAACGAATTGCGCAAAAGACAAGGATGCTGAATTGAGCGGCAAGAGAGATGCTGAATAA 1203 0.4372 MDKLNLAQLGEKLKTSGAQMGRIVSDKMKEILQTPTPESKMVDEATSETLEEPNWGMNLRICAMINSGEFNGSEIVKAIKKKISSKNPVSQRLSLDLLEACTMNCEKVFSEVASEKVLEDMVRMIDNPLTDHQNRRRALQLIRAWGESGDLAYLPVFRQTYMSLKGRSLPLEIDGENSAHVPYSLESHVHEDSLDPPESYPIPDAAFHVMNRSGFSSSPRSLSVEEKKEHLVIARNSLELLSTILNSGAEPKLLKEDVTVSLLEKCRQSLSVIKVIVESTADDEGTLFEALNLNDELQQVVSKYEESEAAQDSRAQPYVAADTTKHVAEAVQNPIGPPESVEGDEPRESDAADRLQRKVSNKPDASEVNSTTVVYNHCEANTTNCAKDKDAELSGKRDAE 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2473 400 Coils Coil 290 310 - -
Prci1g2473 400 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
Prci1g2473 400 MobiDBLite consensus disorder prediction 341 361 - -
Prci1g2473 400 MobiDBLite consensus disorder prediction 332 371 - -
Prci1g2473 400 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Prci1g2473 400 SUPERFAMILY ENTH/VHS domain 34 167 IPR008942 -
Prci1g2473 400 Pfam GAT domain 235 307 IPR004152 GO:0035091|GO:0043130
Prci1g2473 400 Gene3D - 26 182 IPR008942 -
Prci1g2473 400 Gene3D - 214 311 IPR038425 -
Prci1g2473 400 CDD VHS 39 165 - -
Prci1g2473 400 PANTHER TOM1-LIKE PROTEIN 1 1 369 IPR044836 GO:0035091|GO:0043130|GO:0043328
Prci1g2473 400 SUPERFAMILY GAT-like domain 195 307 - -
Prci1g2473 400 Pfam VHS domain 39 147 IPR002014 GO:0035091|GO:0043130
Prci1g2473 400 ProSiteProfiles GAT domain profile. 222 309 IPR004152 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2473 Prci-Chr1 44909846 44912936 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2473 - - qsa:O6P43_006895 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2473 1 44909846 44912936 Prci1g2473 1 44909846 44912936 ECH