Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2429 ATGATCGAATCTCTTCCGCCACCGCCTTCGCCACCCCAATCCACCACACCACCCACCACCGATCAAACTTTCACCTTGATTCCGGGCCTCCCCGTTGACGTCGCGGCTCTCATCCTCTCTTTTATCCCTTATTCCCACCATGCTCGCCTCAAGCCCACGTGCAAATCATGGAAATTCTTCCTTTCCTCCAAAGCTTTCATCTCTCTCCGCCGTCACCACCGTCACCTCTCTCACCTCCTCTGTATCTTCCCTCAGGACCCTTCCATAGACTCCCCTTTCCTCTTTGACCCCTCCTCCCTCGCTTGGTGCCCTCTCCCCCTCATGCCCTGTAACCCCCATGTCTATGGCCTCTGTAACTTCTCCTCTATTTCCATCGGTCCTCACCTCTATGTACTCGGAGGCTCCCTTTTCGACACCCGATCCTTTCCGATGGATCGCCCCTCTCCGACTTCCTCCACTTTTCGTTTCAATTTCCATGATTTCTCCTGGGAACGCCTTGCCCCTATGCTCTCTCCACGTGGCAGCTTCGCCTGTGCCGCCGTCCCTGATTCCCAACAGATTCTGGTGGCCGGTGGAGGGTCGAGACATACGATGTTCGCGGCCGCCGGAAGCCGAATATGTTCCGTGGAGAGGTACGATATTAGGAAGGATGAGTGGGTTGCCATGGATGAATTACCCAACTACCGAGCGGGCTGCGTTGGTCTTTTTGTTAGGAATCGAAAAGGGGACAGCAGGGAGTTCTGGGTGATGGGTGGATATGGTGCTTCGAGGACCATTTCGGGGGTTTTCCCTGTGGATGAGTACTATAGGGACGCCGTGGTAATGGAATTGAAGGATGGGTTTGATGATGGGAGGTGGAGAGAGACTGGGGACATGTTGGGAGACGGGAAGAGGATGAGGCTTGGAAAGATTGTTGTTGTCGAGGACGAGAATCAAGACTATCCCGGCATTTTCATGCTCCACAGGAATGAGATTCTGAGATATGATATGTCTTCGAATCGCTGGCTCTGCGAGTCTCGTGTACCAAGAAAACCTCTACATAACTCATCATTTGGTTTTGTGGTATTAGATGGGGAGCTATATGTGATGACGCATTCAAGTGTAGTTGATATGACTGAAAGGAGGAGGACCAGACACCACAAAAAGGCAGGCTCTCTGTTTATACAAATCTATAACCCGAAGAAGAGGACGTGGAGATCTCTAGTCACCAATTTGCCCTTCAGTTGCCCCATTGATATTAATACTACAGTACTGAGCTCAATTTGTCTGTGA 1272 0.5142 MIESLPPPPSPPQSTTPPTTDQTFTLIPGLPVDVAALILSFIPYSHHARLKPTCKSWKFFLSSKAFISLRRHHRHLSHLLCIFPQDPSIDSPFLFDPSSLAWCPLPLMPCNPHVYGLCNFSSISIGPHLYVLGGSLFDTRSFPMDRPSPTSSTFRFNFHDFSWERLAPMLSPRGSFACAAVPDSQQILVAGGGSRHTMFAAAGSRICSVERYDIRKDEWVAMDELPNYRAGCVGLFVRNRKGDSREFWVMGGYGASRTISGVFPVDEYYRDAVVMELKDGFDDGRWRETGDMLGDGKRMRLGKIVVVEDENQDYPGIFMLHRNEILRYDMSSNRWLCESRVPRKPLHNSSFGFVVLDGELYVMTHSSVVDMTERRRTRHHKKAGSLFIQIYNPKKRTWRSLVTNLPFSCPIDINTTVLSSICL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2429 423 MobiDBLite consensus disorder prediction 1 21 - -
Prci1g2429 423 Gene3D - 302 412 IPR015915 GO:0005515
Prci1g2429 423 Gene3D - 81 277 IPR015915 GO:0005515
Prci1g2429 423 SUPERFAMILY F-box domain 24 112 IPR036047 GO:0005515
Prci1g2429 423 MobiDBLite consensus disorder prediction 1 16 - -
Prci1g2429 423 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 13 423 - -
Prci1g2429 423 SUPERFAMILY Kelch motif 83 401 IPR015915 GO:0005515
Prci1g2429 423 Pfam Kelch motif 178 224 IPR006652 GO:0005515
Prci1g2429 423 Pfam Kelch motif 117 169 IPR006652 GO:0005515
Prci1g2429 423 SMART kelc_smart 186 239 IPR006652 GO:0005515
Prci1g2429 423 SMART kelc_smart 128 183 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2429 Prci-Chr1 44543043 44546385 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2429 - - pper:18768960 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2429 1 44543043 44546385 Prci1g2429 1 44543043 44546385 ECH