Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2355 ATGAGATATGAGAACTCGAAGAAAAGCAAGTTTTCGTGGCCCAAAACATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGGCGAGGACTTTCAGGCTGACGATGTCCTTTGCGGAGGCGTTGATGAAGAGTGGAGGAACAACTATCCAGAGAGGGTGGCGTGCTCCGTCAAGAGAAGCAAGACAGGTAGATCAAGCAGCAGGAGGTACTCGAACAAATTGTGGCGGGGTAAGATTGACCTTGATGCTTCTCAGGTTAAAGATGTGCATAACTATAGGATCTTCGTTGCTACGTGGAATGTGGCTGGAAAATCTCCCCCAAGCTATTTGAATCTTGAAGATTGGCTTCACACTTCTCCACCTGCTGATATCTATGTCCTTGGGTTTCAAGAAATTGTACCTCTTAATGCCAGTAATGTATTGGGCACCGAAGACAATGGCCCGGCTAAAAAATGGCTAGCTCTCATTCGGAAAACTCTAAACAGTCTTCCTGGAACAAGTGGTGGATGCCACACTCCATCACCAATCCCTGATCCACTTGTTGAGTTAGATGCTGATTTTGAGGGATCGATGAGGCAGAAGGAAACCTCTTTCTTCCACCGGAGGTCCTTCCAATCCTTAAGTCGGAGTATGAGAATGGACAGTGACATGTCACTATCACAACCACAGCTCGATCGCCGTCTGAGTGTATGTGATAGAATGATCTTTGGCCATAGGACTAGTGACTATGAGCCCAATTATAGATGGTGTTCCTCAGATGACGAAAATGGACCTGGTGATTCCCCAGTTATAACACAATATTCACCAGTGTCATACGGCGGTTCATTCTCTGCAGATGACAGAGATAGATCGACAGGGCATTCAAGATATTGTTTGGTTGCCAGCAAGCAAATGGTTGGGATATTTTTGACAGTTTGGGTGAAAAGTGATATCAGAGATGAAGTTCACAACATGAAAGTGTCCTGTGTTGGCAGAGGATTGATGGGTTACCTTGGAAACAAGGGTTCGATTTCGATTAGCATGTCTCTGCACCAAACAAGCTTTTGCTTCATCTGTAGTCATTTGACTTCTGGACAAAAAGACGGTGATGAGCTAAGGAGAAATTCAGATGTCTTTGAGATTCTTAGAAAGACGAGGTTTCCCCGGGTTCACCGCATGGGTGATGATAATTCTCCTCAGACAATTCTGGAACATGATCGAATAATTTGGCTGGGGGACTTAAATTATCGGATAGCACTTTCTTACCGTGCTGCAAAAGCCCTTGTTGAGATGCGAAAGTGGAAGGCATTGTTAGAGAATGACCAGTTGCGTATAGAGCAGAGACAAGGCCGTGTCTTTGAAGGATGGAATGAGGGGAAGATATATTTTCCTCCCACCTACAAGTATTCTAATAATTCAGACAGATATGCAGGTGATGAAAGACACTCGAAACAAAAGCGGAGAACCCCAGCATGGTGTGATCGTATATTGTGGCATGGAAGAGGCCTCCGCCAATTATCCTATGTTCGTGGAGAGTCAAGATTCTCTGATCATAGACCAGTATATGGCATATTCGTGGCAGAAGTAGAGTCCATAAACCGAAGCCGGATCAAAAAGAGCTCCAGTTGCTCTAGTGCCAGGATTCAAGTAGAAGAGTTGTTGCCACATTCACATTCTCACAGCTACACTGACTTGAATTTCTATTGA 1686 0.4454 MRYENSKKSKFSWPKTLVKKWFNIKSKGEDFQADDVLCGGVDEEWRNNYPERVACSVKRSKTGRSSSRRYSNKLWRGKIDLDASQVKDVHNYRIFVATWNVAGKSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNASNVLGTEDNGPAKKWLALIRKTLNSLPGTSGGCHTPSPIPDPLVELDADFEGSMRQKETSFFHRRSFQSLSRSMRMDSDMSLSQPQLDRRLSVCDRMIFGHRTSDYEPNYRWCSSDDENGPGDSPVITQYSPVSYGGSFSADDRDRSTGHSRYCLVASKQMVGIFLTVWVKSDIRDEVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDELRRNSDVFEILRKTRFPRVHRMGDDNSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMRKWKALLENDQLRIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDERHSKQKRRTPAWCDRILWHGRGLRQLSYVRGESRFSDHRPVYGIFVAEVESINRSRIKKSSSCSSARIQVEELLPHSHSHSYTDLNFY 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2355 561 FunFam type I inositol polyphosphate 5-phosphatase 4 isoform X1 72 184 - -
Prci1g2355 561 SUPERFAMILY DNase I-like 74 533 IPR036691 -
Prci1g2355 561 Gene3D Endonuclease/exonuclease/phosphatase 71 194 IPR036691 -
Prci1g2355 561 Gene3D Endonuclease/exonuclease/phosphatase 264 546 IPR036691 -
Prci1g2355 561 FunFam Type IV inositol polyphosphate 5-phosphatase 7 260 546 - -
Prci1g2355 561 SMART i5p_5 226 526 IPR000300 GO:0016791|GO:0046856
Prci1g2355 561 Pfam Endonuclease/Exonuclease/phosphatase family 97 511 IPR005135 GO:0003824
Prci1g2355 561 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 538 IPR045849 GO:0004445
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2355 Prci-Chr1 43882990 43887948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2355 125 528 Acyl Lipid Metabolism Gene Families AT2G43900 25.556 2.57e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2355 - - pvy:116111021 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2355 1 43882990 43887948 Prci3g3304 3 43866784 43871528 CCT
Prci1g2355 1 43882990 43887948 Prci1g2355 1 43882990 43887948 ECH