Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2349 ATGGCGTTCAGAGTGATGATGCTGACTCTAGCTGTGGCTCTGGTGGCTACTCAATGGACTCAAACCGCTGCACAATCGAGCTGCACCAGTGCACTCACTAGCATGAGCCCTTGCCTTAACTATATAACGGGAAGTTCACCAACCCCATCGTCTACATGTTGCTCCCAGCTCTCCAGTGTGGTTCAGTCCTCACCACAGTGCCTCTGCTCCGTGCTTAATGGCGGTGGTTCCTCTCTGGGAATCACCATTAATCAAACCCTTGCTCTGTCTCTCCCTGGAGCTTGCAAAGTGCAAACTCCACCCGTAAGCCAATGTAAAGGAGCTGGTAATGCACCGACCACTCCTTCAAATGCTCCAGCAGGGTCTCCAGTTGGTTCTCCTGAAGGGTCCATCGCACCTTCAGCCTCAGACATTCCTAGTGCAGGTGCAGGCTCTAAGACAGTGCCCACAGTAGACGGTGGCTCATCGGACGGAAGCTCCATGAAAGTTTCCTTCCATTCAATGCTCTCACTCCTTCTCATTGCGTCCTTTGTCTCTGCTGTCACTTATTTCTGA 555 0.5207 MAFRVMMLTLAVALVATQWTQTAAQSSCTSALTSMSPCLNYITGSSPTPSSTCCSQLSSVVQSSPQCLCSVLNGGGSSLGITINQTLALSLPGACKVQTPPVSQCKGAGNAPTTPSNAPAGSPVGSPEGSIAPSASDIPSAGAGSKTVPTVDGGSSDGSSMKVSFHSMLSLLLIASFVSAVTYF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2349 184 PRINTS Plant phospholipid transfer protein signature 82 99 IPR000528 GO:0006869|GO:0008289
Prci1g2349 184 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Prci1g2349 184 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Prci1g2349 184 SMART aai_6 28 105 IPR016140 -
Prci1g2349 184 Gene3D - 25 117 IPR036312 -
Prci1g2349 184 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 106 IPR036312 -
Prci1g2349 184 MobiDBLite consensus disorder prediction 106 123 - -
Prci1g2349 184 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 9 157 IPR043325 -
Prci1g2349 184 MobiDBLite consensus disorder prediction 106 159 - -
Prci1g2349 184 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 25 104 - -
Prci1g2349 184 Pfam Probable lipid transfer 12 105 IPR016140 -
Prci1g2349 184 CDD AAI_LTSS 35 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2349 Prci-Chr1 43834707 43835744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2349 1 184 Lipid Metabolism Gene Families AT3G22600 52.406 8.71e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2349 - - gmx:100306151 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2349 1 43834707 43835744 Prci1g2349 1 43834707 43835744 ECH