Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2348 ATGTCTGGATTGATTGAAGGACTTCCTGATGCAGTTGCAATAAGGTGCCTTGCAAGGGTTCCCTTTTTCCTCCACCCGAAGTTAGAGCTTGTCTCTCGCTCTTGGCAAGCAGCCATTCATAGCCCTGAACTATTTAAAGCTCGACAGGAGGTTGGTTCATCTGAGGATCTGTTATGTGTCTGTGCTTTCGATCCAGAGAACCTATGGCAGCTGTATGACCCTCTACGGGATCTCTGGATAACTCTTCCTGTTATTCCATCAAAAATCAGACACCTTTCCCACTTTGGTGCTGTCTCAACTGCTGGAAAGTTGTTTGTGATTGGTGGCGGAAGTGATGCTGTAGATCCATTGACTGGCGATCAAGATGGGAGCTTTGCAACAAATGAAGTCTGGTCATATGACCCCGTAGTCCGGCAGTGGGCCCCGCGGACATCAATGCTAGTGCCACGTGTCATGTTTGCATGCTGTGTTTTGAATGGAAAAATAGTCGTGGCTGGGGGCTTCACTAGCTGCAGAAAATCAATATCTCAGGCAGAAATGTATGACCCTGAAAAAGATGTGTGGATTCAAATGCCTGATCTGCATTGCACCCATAATTCAGCTTGTTCAGGAGTGGTTATTGGGGGAAAGGTTCACGTATTGCATAAAGGGCTGTCGACAGTGCAAGTTTTAGACAATGGAGGGCCTCCTGGGTGGACTGTTCAGGAAAGCGGGTGGCGTCAAGGTCCGATGGCAGTTGTTGGAGGTGCCCTCTATGTGATGAGCCATGGATTTATCATCAAGCAGGACAAAGGAGAGAGAAAGATAGTGGGTTCAGCATCAACTCGAAGAATTGGGTTTGGAATGATTGGGGTTGGTGATGATTTGTATGTGATTGGAGGAGTCATTGGCCCTGACAGGTGGAACTGGGACATTAAGCCTTTGGCTAATGTTGATATTCTCACACCTGGGAGTGACAGAACAACCTGGCGTCAGGCATCTCCAATGTCACGGTGTCGTGGTACTATCCTTGGTTGTACGCTGCTGAGAATTTAG 1035 0.4783 MSGLIEGLPDAVAIRCLARVPFFLHPKLELVSRSWQAAIHSPELFKARQEVGSSEDLLCVCAFDPENLWQLYDPLRDLWITLPVIPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGDQDGSFATNEVWSYDPVVRQWAPRTSMLVPRVMFACCVLNGKIVVAGGFTSCRKSISQAEMYDPEKDVWIQMPDLHCTHNSACSGVVIGGKVHVLHKGLSTVQVLDNGGPPGWTVQESGWRQGPMAVVGGALYVMSHGFIIKQDKGERKIVGSASTRRIGFGMIGVGDDLYVIGGVIGPDRWNWDIKPLANVDILTPGSDRTTWRQASPMSRCRGTILGCTLLRI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2348 344 PANTHER OS02G0202900 PROTEIN 3 256 IPR045887 -
Prci1g2348 344 SMART fbox_2 8 48 IPR001810 GO:0005515
Prci1g2348 344 Gene3D - 60 342 IPR015915 GO:0005515
Prci1g2348 344 Pfam Kelch motif 92 146 IPR006652 GO:0005515
Prci1g2348 344 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Prci1g2348 344 Pfam Kelch motif 276 330 IPR006652 GO:0005515
Prci1g2348 344 SUPERFAMILY Kelch motif 61 333 IPR015915 GO:0005515
Prci1g2348 344 SMART kelc_smart 288 343 IPR006652 GO:0005515
Prci1g2348 344 SMART kelc_smart 103 160 IPR006652 GO:0005515
Prci1g2348 344 SMART kelc_smart 161 208 IPR006652 GO:0005515
Prci1g2348 344 CDD F-box_AtAFR-like 4 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2348 Prci-Chr1 43826939 43830295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2348 8 268 Miscellaneous Gene Families AT4G33900 26.545 1.09e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2348 - - gmx:100800954 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2348 1 43826939 43830295 Prci1g2348 1 43826939 43830295 ECH