Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2336 ATGGATACTCCTGTGAACAGCCGCTCCTCGTCAATGGCCAAGCGTCCCTGTCCTCCCCCAAACCAGAACCCTAGATTTCAAAACCTCAACCAGGTGGATCAGCTCCTCGAAGATTTCCTCCGCCTTTCCGAATTCCCTTCCCTCTCCCTGGATCTCTCCTTGGAGAGGCTTCTCTCTTCATTGCCCACCGATGCCGATCAGACCATTCTCATCAATCGCGCCCTTCATATGGGATCCATGCTTCTTGATGCTGCCAAGCACTCTTCCCGAAAGCGAGCCTCCAAGCACAATTCTTTTGTTTGGCCCCTCCCTCCTGACCTTACCGTCAAAGTGTTTTCTTTGCTTGATACCCAGAGCCTATGCTATGCAGCAGCTACTTGTTCTATGTTCAACAAATGTGCCAGGGATCCTTTGTGCTATGAAAACATTGATTTGACAACACTTGTTCCCAAGGTTAACAATGCAGTAGTTTCCACGATGATTCAGCGAGCTGGAAAGGCCTTAAGGTCTCTTAGGCTCGGTGTAGTTGCTGGTGCTCACGCATCGCCAGGATCCTGTCAGCCATTGGTTTATACCATCAGAAATGCCATCGTGGATGTATCTAACTTTTCATGGAATGACAAGAGATCTCGGCAAGGGAGAGAGTCATCCATTCTTACTAGATCCTGTTTAAGCCCTTTAAACGGATGTGGTGGTGCTCCAGGGACTCTTCTGAGAAAGTTGCACTTGTACAATATTGAAAGAATCGACAATGCATCCCTTTGTGCGGCATTAGCGGCCTGCCCTTCTCTACTTGACCTGGAAATAGTTGGACTTCATGTAGAACTGAGGCAAACATTAATGACAGTGAGTACGAACTGCCACTTGATTGAGCGTTTGTTTTTTGAGTCTTCAAAAACAGGCAGAGATGACAGTTTGAAAACGCCAACCTGCATTCTTCTTGTTAACAGTTGTCCCCATCTAATTTCTTTGTCCCTTAGAGGGTTTAAGTTACATGATTGTAAAGTCCGTATACTGCTTAAGGGATTTCAGAAACTAAAATATGTTGATTTTTCAACATCCTATTCAATCACTGGAAACTTTTTAAGAAACCTTGGAAGTAGCAATGGAGGGAATTCACTTGAGGTATTGATTTTGAGGGACTGCATGCATCTGAAAGAGGTGGAAGTTGCTAGATTGTTGACGTCAATTCTCGCAGGAGATTTCAAATGTCTTGTACATCTTGACATATCCAATAGGGAAGGCTTAGCATCTGATGGGGACTGGTATCACAGGTGCTACAACTCTAGTATCATGCCTCTTAAGCATGTTTTGGAAGCAAGGCCTGATTTGTGTTTGCTGGCTGAATATCCATCAGAAGGAAGTTACATTGAGACATTTTATGCTGAACTGAATGGTGATATGAGTTTTCCATTACAATTGAGCAGCCATACCTCAGATGAAATAAATTGTTTGAGTACATCTGAAAGCAGCTACAATAGTGATCAGGGCAGTGGCAATGAGGATGGTCAAGAAGCCAGCTATGTGATTTGTGAGGAAAGTTCAGATGAGACAGACTTTCTGGCCCTGTAG 1572 0.444 MDTPVNSRSSSMAKRPCPPPNQNPRFQNLNQVDQLLEDFLRLSEFPSLSLDLSLERLLSSLPTDADQTILINRALHMGSMLLDAAKHSSRKRASKHNSFVWPLPPDLTVKVFSLLDTQSLCYAAATCSMFNKCARDPLCYENIDLTTLVPKVNNAVVSTMIQRAGKALRSLRLGVVAGAHASPGSCQPLVYTIRNAIVDVSNFSWNDKRSRQGRESSILTRSCLSPLNGCGGAPGTLLRKLHLYNIERIDNASLCAALAACPSLLDLEIVGLHVELRQTLMTVSTNCHLIERLFFESSKTGRDDSLKTPTCILLVNSCPHLISLSLRGFKLHDCKVRILLKGFQKLKYVDFSTSYSITGNFLRNLGSSNGGNSLEVLILRDCMHLKEVEVARLLTSILAGDFKCLVHLDISNREGLASDGDWYHRCYNSSIMPLKHVLEARPDLCLLAEYPSEGSYIETFYAELNGDMSFPLQLSSHTSDEINCLSTSESSYNSDQGSGNEDGQEASYVICEESSDETDFLAL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2336 523 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 102 502 - -
Prci1g2336 523 Gene3D Ribonuclease Inhibitor 96 438 IPR032675 -
Prci1g2336 523 MobiDBLite consensus disorder prediction 485 503 - -
Prci1g2336 523 SUPERFAMILY F-box domain 89 148 IPR036047 GO:0005515
Prci1g2336 523 Pfam F-box-like 103 145 IPR001810 GO:0005515
Prci1g2336 523 SUPERFAMILY RNI-like 235 421 - -
Prci1g2336 523 MobiDBLite consensus disorder prediction 1 16 - -
Prci1g2336 523 MobiDBLite consensus disorder prediction 485 505 - -
Prci1g2336 523 MobiDBLite consensus disorder prediction 1 25 - -
Prci1g2336 523 FunFam F-box protein isoform A 96 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2336 Prci-Chr1 43733673 43740861 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2336 K10268 - gmx:100786317 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2336 1 43733673 43740861 Prci1g2336 1 43733673 43740861 ECH