Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2327 ATGGAGCTCAGCAAGGTGACGCTGGAAATCTTCTCCAAATTGGAACAGAAATGGCTTTCTCACTGTGAAACCTCCAAGAAAACTCGCATTCTCAGTATCGACGGTGGAGGAACCACCGGCATTGTAGCCGGAGCCGCCCTCCTCCGCCTCGAGGAACAGATCCGTCTCCAGACCGGCGATTCCGACGCTCACATAGCCGATTTCTTCGACATCGTTGCGGGCACTGGCATTGGCGCCATCCTCGCCGCCATGATCACCGCCGACGATGGCTCCGGCAGGCCTCTCTATACTGCTAAGGACGCCGTCCACGTCATCACCGAGAGGAATTCGGAACTCTACAGGCCTACCGCCGGAGTGTTTCGCCGGCGCCGGAGACTTTCTTCCAGGAGCATGGATAGCGTGTTGAAGCAACTCTTCCAGAGAAGAGAGGACGGAAAGTTGTTGACCTTGAAGGACACGTATAAACCCCTGCTCATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCATTCGTGTTTTCCAGGGCCGACGCGTCAGAATCGCCGAGTTTCAACTTCGAGCTCTGGAAGGTATGCCGCGCTACCACAGCCACGCCCAGCCTCTTCAAGCCCTTCCACTTTACTTCCGTCAACGGAAAGACCAGCTGCTCAGCAGTGGACGGCGGCCTGGTGATGAACAACCCAACGGCGGCGGCGGTGACGCACGTGCTACACAACAAGCGGGATTTCCCGACGGTTAACGGAGTGGAGGATCTCCTGGTACTGTCCCTAGGCAACGGCGCGTCAGGCGGAACACGGGGGCAAAAAATAAGTGACAATGGGGAGTGTTCGACGTCGTGCGTGATCGACATTGTGGTGGATGGAGTCTCCGAGACGATCGACCAAATGTTGGGGAACGCCTTCTGTTGGAACCATACGGATTACGTAAGGATCCAGGCGTTGGGTTTGGGAAGGACGAGAGAGGAGGTGCTGAAAGAGAGAGGACTAGAGTCACTAGCGTTTGGGGGAAAGAGGTTGCTGAAAGAGAGTAACGAACAGAGAATCGATAGCTTCGTGCAGCGTCTTGTCGCTTCTGGAAAGTCCAGCCTCCCGCCTAGTCCCTGCAAGCATTCCGCCGTTACTCCTCTCGCCGTCGCTGAGGCCCGCTAG 1146 0.5663 MELSKVTLEIFSKLEQKWLSHCETSKKTRILSIDGGGTTGIVAGAALLRLEEQIRLQTGDSDAHIADFFDIVAGTGIGAILAAMITADDGSGRPLYTAKDAVHVITERNSELYRPKXAGVFRRRRRLSSRSMDSVLKQLFQRREDGKLLTLKDTYKPLLIPCFDLKSSAPFVFSRADASESPSFNFELWKVCRATTATPSLFKPFHFTSVNGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPTVNGVEDLLVLSLGNGASGGTRGQKISDNGECSTSCVIDIVVDGVSETIDQMLGNAFCWNHTDYVRIQALGLGRTREEVLKERGLESLAFGGKRLLKESNEQRIDSFVQRLVASGKSSLPPSPCKHSAVTPLAVAEAR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2327 382 CDD Pat17_PNPLA8_PNPLA9_like 30 313 - -
Prci1g2327 382 Gene3D Cytosolic phospholipase A2 catalytic domain 17 363 - -
Prci1g2327 382 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Prci1g2327 382 SUPERFAMILY FabD/lysophospholipase-like 26 314 IPR016035 -
Prci1g2327 382 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Prci1g2327 382 PANTHER PATATIN-LIKE PROTEIN 6 1 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2327 Prci-Chr1 43656354 43658135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2327 1 377 Acyl Lipid Metabolism Gene Families AT3G63200 74.737 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2327 - - cave:132170759 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2327 1 43656354 43658135 Prci3g3323 3 44008288 44010104 CCT
Prci1g2327 1 43656354 43658135 Prci1g2327 1 43656354 43658135 ECH