Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2316 ATGGCGGTTCATTCCTCCTTCGCCGGTCGTTCTGGAGTTCGAGTCGCCGTCATCGGTGACCGAGGTACCGGCAAATCCAGTTTGATAGCTGCTGCGGCTTCTGAGTCCTTCCCCGACGCCGTCCCCCTGGTCCTGCCCCCCACTCTGTTGCCTGATGATTGGTTCCCCGATCATGTTCCGCTTACCATCATTGACACATCTTCCAGCTTGGAAAAACGGGGCAAGCGCAACGACGAGCTGAAGCGAGCTGATGTAGTGATTTTGACATATGCTTGTGATGAACCGACGACCATTACTCGTCTTAGTACTTACTGGATCCCTGAACTGGAGGAGTTGGAGGTAAGGGCACCTGTAATTGTGGTTGGTTGCAAGCTAGATCTACAGGACGAGAATCAGCAAATAAACTTAGAGAATCTCATGACGCAGCTCCTACAACAGTATAGTGAAATCGTGACCTGCATTGAATGCTCTGCTGCTACACTATATCAGGTCCCTGAAGTTTTTTATTTTGCTCAAAAAGCAGTACTGCATCCAGTGGACCCATTGTTTGATCACGAGAGGCAAGCTTTAACAGATAGATGTTTAAGGGCACTGAGAAGAATTTTTGTCCTCTGTGATAGAGACATGGATGGTGCCCTCAATGATGCAGAGCTAAATGGATTTCAGGTTAGATGTTTTGATACGCCATTGCAGTCAGCTGAAATAATGGAAGTCAGAACACTTATTCAGCAGCAAGCACCTGAAGGAATCAACCGGCATGGTCTTACTTTTGCAGGCTTTACTTATATCCATAACACATTCCTGAAGAAAGGGCGTCCTGAGACAATATGGGCTGTTCTGAGAAAATTTGGATATAATAATGATTTAAAACTCCGTGATGATTTTCTTCCAGTTCCATCTAACTATGCATCCGATCAGAGAGTGGAGCTGACAAATGAAGCTGTAGAATTTCTGAATGGTATCTTCCGATTGTTAGATACAGATAGAGACCGAGCCGTACAACCTGCAGAGCTTGATAAGCTATTTTCTACTGCCCCAGAAAGTCCATGGAGTGATGATCCATATAAGGATGCTGTTGAGAGAACTGACGCAGGCTACATGACTCTCAGTGGATTTCTGTCCCAGTGGGCTTTCATGACATTACTTGATCCACCATCTAGCCTGGCCAATTTGATTTACATTGGATATAGTGGCAATCCCGCTGCAGCACTCCGCGTTACTCGTAAGAGATCTGTAGACCGTAAGAAACAAAAAACAGGAAGAAATGTGTTCCAGTGCTATGTCTTTGGTTCGAAAAATGCTGGGAAATCTACTTTGTTGCATTCATTTTTGAGAAGGCCATTCTCTGATACATATACTCCGACAATGGTCGAGCAATATGCCGCAAATATTGTTGAATTAATTGGGTTCAATGTACAGGGGACTAGAAAAACTCTTATTTTGCGGGAGATACCTGAGGATAAAGTGAAGAAATTTTTGCCAAATCGGGATTGTTTGGCTGCATGTGATGTTGCTGTTTTTGTATATGACAGATGA 1536 0.444 MAVHSSFAGRSGVRVAVIGDRGTGKSSLIAAAASESFPDAVPLVLPPTLLPDDWFPDHVPLTIIDTSSSLEKRGKRNDELKRADVVILTYACDEPTTITRLSTYWIPELEELEVRAPVIVVGCKLDLQDENQQINLENLMTQLLQQYSEIVTCIECSAATLYQVPEVFYFAQKAVLHPVDPLFDHERQALTDRCLRALRRIFVLCDRDMDGALNDAELNGFQVRCFDTPLQSAEIMEVRTLIQQQAPEGINRHGLTFAGFTYIHNTFLKKGRPETIWAVLRKFGYNNDLKLRDDFLPVPSNYASDQRVELTNEAVEFLNGIFRLLDTDRDRAVQPAELDKLFSTAPESPWSDDPYKDAVERTDAGYMTLSGFLSQWAFMTLLDPPSSLANLIYIGYSGNPAAALRVTRKRSVDRKKQKTGRNVFQCYVFGSKNAGKSTLLHSFLRRPFSDTYTPTMVEQYAANIVELIGFNVQGTRKTLILREIPEDKVKKFLPNRDCLAACDVAVFVYDR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2316 511 ProSiteProfiles EF-hand calcium-binding domain profile. 313 348 IPR002048 GO:0005509
Prci1g2316 511 FunFam Mitochondrial Rho GTPase 291 485 - -
Prci1g2316 511 PANTHER RHO FAMILY GTPASE 13 188 IPR003578 GO:0005525|GO:0007264
Prci1g2316 511 Pfam EF hand associated 350 418 IPR013566 -
Prci1g2316 511 SUPERFAMILY EF-hand 188 377 IPR011992 -
Prci1g2316 511 Gene3D - 185 289 - -
Prci1g2316 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 420 510 IPR027417 -
Prci1g2316 511 ProSitePatterns EF-hand calcium-binding domain. 206 218 IPR018247 -
Prci1g2316 511 Pfam Ras family 15 175 IPR001806 GO:0003924|GO:0005525
Prci1g2316 511 Pfam EF hand associated 228 313 IPR013567 -
Prci1g2316 511 FunFam Mitochondrial Rho GTPase 10 180 - -
Prci1g2316 511 FunFam Mitochondrial Rho GTPase 185 289 - -
Prci1g2316 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 210 IPR027417 -
Prci1g2316 511 Gene3D - 10 180 IPR027417 -
Prci1g2316 511 ProSitePatterns EF-hand calcium-binding domain. 326 338 IPR018247 -
Prci1g2316 511 Gene3D - 291 485 - -
Prci1g2316 511 SMART rho_sub_3 15 178 IPR001806 GO:0003924|GO:0005525
Prci1g2316 511 ProSiteProfiles Miro domain profile. 10 177 IPR020860 GO:0003924|GO:0005525
Prci1g2316 511 SMART rab_sub_5 13 178 - -
Prci1g2316 511 PRINTS Transforming protein P21 ras signature 153 175 - -
Prci1g2316 511 PRINTS Transforming protein P21 ras signature 114 127 - -
Prci1g2316 511 PRINTS Transforming protein P21 ras signature 13 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2316 Prci-Chr1 43579501 43588366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2316 1 510 EF-hand Containing Proteins AT3G63150 61.373 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2316 K07870 - gmx:100803790 776.548