Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2311 ATGGAAGCTACTCGGTTCAGCTCACATGTCTTACATCCACATAGCTTTCGAGCTAATCCCAAGATATTTCGAGGCAGACAATCAGAACAAATCCAATTTTACTGTATAAAGTGCCATAAAACGTGGGGTTCTTCATTTGAAAGAAGGCAATCCCTATTGCTGAACAGGTCTTCGTTTAATAGAGTAAACTGGAAGCATTCTTTCAACTTCTCTTATAAGCATCGAAGTGACTATTTGCATGTGGAACCTCCAAATATCCAGCATTCAGATCAAGAAATTCTTCCTCCAACTCAAAGTGATGGGGCAGGGGTTCTTGCATCTTCTGATCCCCATAACCTGGACTTGAGACCCAAAAAGTATAAAAATAGGTTTCTTAATTTTGTTCGCTTGAGTTCTGTCCTGAATGGGATTGCTGAATCATTTTTCAAAAGTGAGATACGAAGGAGGTTGTTTGTGACTGCTGTGCTAATTGTACTCAGCCGTGTTGGCTATTTTGTTCCTCTACCTGGCTTTGATAGGAGGTTGATACCACAAGACTACCTAAGCTTTGTCTCAGGATCTGTTGATGAACTTGGTGACTACACCTCTGAGCTCAAACTTTCTCTTTTCCAGCTCGGAATCAGTCCTCAGATAATAGCATCCATTATTATGCAGGTTCTTTGTCATATGGTTCCTTCTCTGGTGAAACTGCGAAAGGAAGGTCTAGATGGACATGAGAAGATAAAGAGTTATATATGGTGGATGTCACTTGGCTTTGCAATTTTGGAAGCTCTAATACTTGCATGCTACTCACTTCCATATTCAATTTATGCTGCCAATCAAAGGGTCAAGCATGTGATGTTAACAACTCTTTTGTTGGTATGCGGTGCAATGACTATAACATGGATATGTGATACCATCTCAGAATCCGGATTTGGTCAAGGTTCTTCGCTTATTATATGTGTGGGGATATTGACGGGTTATATGGAAACATTGCACAAAATGCTGACTCAGCTCTCAGTGAGTGCCGTTAGTTGGTGGCCCTATGTACTTGCAGTATTGGGTCTATTTACAATTGTCACTATGTGGGCAGTTGTAGTCACTGAAGGTTGCAGGAAAGTGAAACTTCAATACTATGGTTTCAAACTTGCTTCTGCTGCAAGAGAGCAATCCCCAATTACTGAAGTGGAGCCCTATATTCCTTTCAACATTAACCCATCAGGAATGCAACCTGTTCTTACCACCACTTACCTCTTGGCGTTTCCAAGTATTCTTGCAAGTTTGCTTGGTTCACGTTTCTGGGAGCATGTGAAGGAGATATTGAACCCTGATACATCTGCTGGTGCTGAGCCTTGGGTTTACTACTCCGTATATGCTTTTTTCGTCTTCTTATTCAATATATTTGATATTGCCAACTTGCCCAAGGAAATTGCCGATTACTTGAATAAGATGGGTGCCAGGATACCTAACATAAAGCCTGGGAAGGCAACAATAGAATACCTTTCAAAAGTTCAGGCATCCACACGATTTTGGGGTGGCCTATTGTTAAGTGTTTTGGCAACCACATCAAGCATTCTTGATCATTATTTACGGCGTACCAATGCTGGATTTGCAATTGGGTTCACATCAGTATTGATTATTGTTGGTTCCATTATTGAGCTAAGAAGATCATATCAAGCCTATAATGTAATGCCAAGTTTAAGCAAGGCTCTGAGACGGTATGGTGTATAG 1710 0.4088 MEATRFSSHVLHPHSFRANPKIFRGRQSEQIQFYCIKCHKTWGSSFERRQSLLLNRSSFNRVNWKHSFNFSYKHRSDYLHVEPPNIQHSDQEILPPTQSDGAGVLASSDPHNLDLRPKKYKNRFLNFVRLSSVLNGIAESFFKSEIRRRLFVTAVLIVLSRVGYFVPLPGFDRRLIPQDYLSFVSGSVDELGDYTSELKLSLFQLGISPQIIASIIMQVLCHMVPSLVKLRKEGLDGHEKIKSYIWWMSLGFAILEALILACYSLPYSIYAANQRVKHVMLTTLLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLHKMLTQLSVSAVSWWPYVLAVLGLFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPSGMQPVLTTTYLLAFPSILASLLGSRFWEHVKEILNPDTSAGAEPWVYYSVYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSILDHYLRRTNAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRYGV 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2311 569 PRINTS Preprotein translocase SecY subunit signature 400 419 - -
Prci1g2311 569 PRINTS Preprotein translocase SecY subunit signature 533 551 - -
Prci1g2311 569 PRINTS Preprotein translocase SecY subunit signature 200 220 - -
Prci1g2311 569 PRINTS Preprotein translocase SecY subunit signature 276 301 - -
Prci1g2311 569 PRINTS Preprotein translocase SecY subunit signature 302 325 - -
Prci1g2311 569 PRINTS Preprotein translocase SecY subunit signature 241 264 - -
Prci1g2311 569 PRINTS Preprotein translocase SecY subunit signature 445 467 - -
Prci1g2311 569 PRINTS Preprotein translocase SecY subunit signature 150 168 - -
Prci1g2311 569 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 140 557 IPR002208 GO:0015031|GO:0016020
Prci1g2311 569 Gene3D SecY subunit domain 133 559 IPR023201 -
Prci1g2311 569 FunFam Preprotein translocase subunit SCY2, chloroplastic 134 559 - -
Prci1g2311 569 SUPERFAMILY Preprotein translocase SecY subunit 130 554 IPR023201 -
Prci1g2311 569 Pfam SecY 201 547 IPR002208 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2311 Prci-Chr1 43555693 43562949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2311 18 569 Miscellaneous Gene Families AT2G31530 72.514 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2311 - - qsa:O6P43_034432 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2311 1 43555693 43562949 Prci1g2311 1 43555693 43562949 ECH