Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2258 ATGAAGAAAGGCAAGGGAAAGAACAACGGCTTGTTGCCCAATTCATTGAGGATTATCTCTTCCTGCCTCAAGACTGTGTCCACGAATGCTAGCACCGTTGCTTCCACTGTACGCTCTGCTGGCGCCTCTGTCGCTTCTTCCATCTCCTCTCCTTCTGAGGATCACAAGGATCAGGTAACATGGGCTGGTTTTGATAGGCTGGAGCTTGAGCAGTCTATCTTTAAGCATGTTCTTTTGCTTGGTTATCTAAATGGATTTCAAGTTCTTGATGTGGAGGATGCCTCTAGCTTTAGTGAACTGGTCTCAAAGCGTGATGGTCCTGTTTCTTTCTTACAGATGCAACCTTTCCCTGTAGGCACTGATGGTCAAGAAGGGTTTAGAAAATCACATCCGATACTGCTGGTTGTTGCTGGTGATGACTCCAGCAGTAATATCCAGAATTGCACCCATTTGGGTGGTTTTGGAAGGGATGGTATTGTCGAGACTCAATCTGGGAACTGTGTCAAATCTGCAACAGCTGTTCGGTTTTACTCCCTGAAGTCTCATAGTTATGTCCATATTCTGAGATTTCGGTCCACAGTCTGTATGATCAGATGCAGTTCTCGCATAGTAGCTGTTGGTCTTGCCACACAAGTTTATTGCTTTGATGCATTGACTCTTGAGAATAAATTTAGCGTGCTCACCTATCCTGTTCCTCAGCTAGCAGGACAAGGAACTGCAAGTGTTAATGTTGGTTATGGTCCACTGGCTGTGGGTCCAAGGTGGTTAGCATATGCTTCTAACAGTCCACTGCCCTTAAATGTAGGCCGCTTGAGCCCACAAAACCTGAGTCCTTCTCCAGGAGCTAGTCCATCAACATCTCCTGGCAGTGGTAGTTTGGTTGCTCGTTATGCAATGGAGTCTGGCAAACATCTGGCTTCTGGAATTATCAAATACTGTCAAGAGCTGCTTCCTGATGGTTCTAGTTCTCCAGTGCCATCAAATTCAGGTTGGAAAGTTGGTAGGGTTGCAGGAATGGATATGGATAATGCAGGAATGGTTGTTGTGAAAGATTTTGTATCCAGAGCCATCATTTCACAGTTTAAGGCACACACTAGTCCTATATCTGCACTATGTTTTGACCCTAGCGGGACTCTTCTTGTCACTGCATCAGTCTATGGGAATAACATCAACATCTTCCGGATAATGCCAACATGCACACGCAAGGGATCAGGTGTTCCAAGCTATGACTGGAGCTCTTCTCATGTGCATCTTTATAAACTTCATCGTGGAATAACATCAGCTATGATCCAGGATATTTGTTTCAGCCATTTTAGCCAATGGATTGCCATTGTTTCATCCAAGGGGACTTGTCATCTTTTTGTTTTGTCTCCATTTGGAGGTGGTACTGGTTTCCGAATTATTAATTCTCAGGGTGAAGAACCCTCCTTGCTTCCAGTTTTATCACTACCTTGGTGGTCCACATCATATTCCATGTCTGATCAGCAATCTTTGCCTCCTCCAGCACCGGCTGTCCTTTCTGTAGTGTGCCGCATAAAATATAGCAGTTTTGGATGGCTTAATACGGTACATAGTTCTGCTGCTAATGCAACAGGAAAAGTTTTTGTGCCCTCTGGTGCTCTTGCTGCTGTCTTTCATAATTCGTTATCTCACTCACAGAAGCATGTCAATATGAAGTCAAAGTCCCTTGAGCATCTGTTGGTCTACACACCATCTGGTCATGTTGTTCAACATGAACTTCTGCCTTCTGTTGGCCCAGAACCTAGTGATAGTGGTTCAACCCAGTCAGCTTCACTCATGCACATGCAAGATGATGAGTTCAGAGTAAAAGTTGAACCTATTCAGTGGTGGGATGTATGTAGAAGATCAGAATGGCTAGAACGAGGGGATCCTTGCTGCAATACTTTTGATAAACAAGATGGTACTGAGATGGTTCAAGAAAAAACAAGCTCTCCTGATGGTGGTATATTGGATTATTTGGATATAGATGATGGTGCTGGGGAAAGGGTGGTAAAATGTTCTACTGGAAAGGCCCAAGAAAGATCCCAGTGGCATCTATCTAATGCTGAGGTACAAGTAAACTTTGGAAGGCTTCCCATATGGCAAAAGTCTAAGATTTGCTTCTACACTATGAATTCTTTGAGAACTAGTACTGTTGTTAGTGGAGAGTCTGAAATTGAACAGATATCTTTTAATGAAGTTGAAATAAAAAGGAAGGAGTTGTTGCCTGTTCTTGATCATTTCCACAGCATCAGACCGAGCTGGAATGAGAGAGGTTTTACTGGGGAAAGATCTTCAAGTTCTTCATCTTCAGTTTCTCATCAGGCAGAAGACAAGACAACTGCTGATGTGACAGTCATTTGTCACTCAAAGCCAGCGTCACTCAGTTCTACTGAAAGCTCTGATGGGGGTTCATCAAGAAGAACTGAAAATTTTCTTGAACTGGATCAAGTTGCATCTAGTTGTCAGATGTTTAATGAGATCTACTTGGAACGGATGGGGGCAATCATCGTTGAGCCTTCCCTGCAGAACCATATCTTGTCAGAAAATCTGTCTTTCCTTTCTGGAGATTCGAAGCATGTTGATGTGCGTGCTGACCGTAGCATCCAAAGTGGTTTACTATTTCAGGAGAATGGGGTAACACCTGGAACGCAAGATGGTGCAGGTGTTGGGATCGATGATGATTCAATGCCAGTACCAGACCAAGATGCTCCCACTGGAAAGCTTCAGGAGGTGCCATCAATAATGCATGATACAGTAGTGGGTCAATCTTTCCAGGATGACCATTGCAAGACACTGGAGCATCATGGAAGTGACTCATTGACTGAAGTTGGAACCGATGATGTTGATAGCAGCAGCGGCCAACATGAAAGGGAGCAACCAGGGGAGGATGAAGGAGATGGAGAAATGTTTGGTGGCATATTTGCCTTTTCCGAGGAAGGTTGA 2946 0.4413 MKKGKGKNNGLLPNSLRIISSCLKTVSTNASTVASTVRSAGASVASSISSPSEDHKDQVTWAGFDRLELEQSIFKHVLLLGYLNGFQVLDVEDASSFSELVSKRDGPVSFLQMQPFPVGTDGQEGFRKSHPILLVVAGDDSSSNIQNCTHLGGFGRDGIVETQSGNCVKSATAVRFYSLKSHSYVHILRFRSTVCMIRCSSRIVAVGLATQVYCFDALTLENKFSVLTYPVPQLAGQGTASVNVGYGPLAVGPRWLAYASNSPLPLNVGRLSPQNLSPSPGASPSTSPGSGSLVARYAMESGKHLASGIIKYCQELLPDGSSSPVPSNSGWKVGRVAGMDMDNAGMVVVKDFVSRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPTCTRKGSGVPSYDWSSSHVHLYKLHRGITSAMIQDICFSHFSQWIAIVSSKGTCHLFVLSPFGGGTGFRIINSQGEEPSLLPVLSLPWWSTSYSMSDQQSLPPPAPAVLSVVCRIKYSSFGWLNTVHSSAANATGKVFVPSGALAAVFHNSLSHSQKHVNMKSKSLEHLLVYTPSGHVVQHELLPSVGPEPSDSGSTQSASLMHMQDDEFRVKVEPIQWWDVCRRSEWLERGDPCCNTFDKQDGTEMVQEKTSSPDGGILDYLDIDDGAGERVVKCSTGKAQERSQWHLSNAEVQVNFGRLPIWQKSKICFYTMNSLRTSTVVSGESEIEQISFNEVEIKRKELLPVLDHFHSIRPSWNERGFTGERSSSSSSSVSHQAEDKTTADVTVICHSKPASLSSTESSDGGSSRRTENFLELDQVASSCQMFNEIYLERMGAIIVEPSLQNHILSENLSFLSGDSKHVDVRADRSIQSGLLFQENGVTPGTQDGAGVGIDDDSMPVPDQDAPTGKLQEVPSIMHDTVVGQSFQDDHCKTLEHHGSDSLTEVGTDDVDSSSGQHEREQPGEDEGDGEMFGGIFAFSEEG 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2258 981 SMART WD40_4 354 394 IPR001680 GO:0005515
Prci1g2258 981 SMART WD40_4 412 455 IPR001680 GO:0005515
Prci1g2258 981 MobiDBLite consensus disorder prediction 950 965 - -
Prci1g2258 981 Pfam Breast carcinoma amplified sequence 3 501 743 IPR022175 -
Prci1g2258 981 MobiDBLite consensus disorder prediction 930 981 - -
Prci1g2258 981 Gene3D - 283 488 IPR015943 GO:0005515
Prci1g2258 981 MobiDBLite consensus disorder prediction 270 289 - -
Prci1g2258 981 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 3 964 IPR045142 GO:0006914
Prci1g2258 981 MobiDBLite consensus disorder prediction 759 779 - -
Prci1g2258 981 SUPERFAMILY WD40 repeat-like 172 454 IPR036322 GO:0005515
Prci1g2258 981 Pfam WD domain, G-beta repeat 359 386 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2258 Prci-Chr1 43167528 43173752 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2258 - - gmx:100785780 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2258 1 43167528 43173752 Prci1g2258 1 43167528 43173752 ECH