Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2251 ATGAGTTCCACGGGATCAGCCAAAGGTGGAAGGGGTAAGCCCAAATCCTCTAAGTCTGTTTCTAGGTCTCAGAAGGCTGGTCTTCAGTTTCCCGTTGGCCGCATCGCCCGATTTCTTAAGGCCGGTAAGTACGCCGAGCGTGTTGGTGCCGGTGCTCCCGTCTATCTCGCTGCCGTATTGGAATATCTTGCCGCTGAGGTTCTTGAGCTTGCTGGCAACGCTGCTAGAGATAACAAGAAGAATCGCATTGTTCCAAGGCATATTCAGCTTGCAGTCCGTAATGATGAGGAGTTAAGTAAGCTCTTGGGATCCGTCACTATTGCTAATGGTGGTGTTTTGCCAAATATCCATCAAAATCTCTTGCCCAAGTCGATGGGGAAAGGAAAAGGCAATATTGGATCAGCATCCCAAGAATTCTAA 420 0.4881 MSSTGSAKGGRGKPKSSKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQNLLPKSMGKGKGNIGSASQEF 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2251 139 ProSitePatterns Histone H2A signature. 26 32 IPR032458 -
Prci1g2251 139 Gene3D Histone, subunit A 3 131 IPR009072 GO:0046982
Prci1g2251 139 PRINTS Histone H2A signature 62 75 IPR002119 GO:0000786|GO:0003677|GO:0030527
Prci1g2251 139 PRINTS Histone H2A signature 104 122 IPR002119 GO:0000786|GO:0003677|GO:0030527
Prci1g2251 139 PRINTS Histone H2A signature 47 62 IPR002119 GO:0000786|GO:0003677|GO:0030527
Prci1g2251 139 PRINTS Histone H2A signature 18 40 IPR002119 GO:0000786|GO:0003677|GO:0030527
Prci1g2251 139 PRINTS Histone H2A signature 76 90 IPR002119 GO:0000786|GO:0003677|GO:0030527
Prci1g2251 139 SMART h2a4 7 127 IPR002119 GO:0000786|GO:0003677|GO:0030527
Prci1g2251 139 Pfam C-terminus of histone H2A 96 129 IPR032454 -
Prci1g2251 139 SUPERFAMILY Histone-fold 21 123 IPR009072 GO:0046982
Prci1g2251 139 CDD H2A 12 123 IPR002119 GO:0000786|GO:0003677|GO:0030527
Prci1g2251 139 Pfam Core histone H2A/H2B/H3/H4 8 93 IPR007125 GO:0003677
Prci1g2251 139 PANTHER HISTONE H2A 11 123 IPR002119 GO:0000786|GO:0003677|GO:0030527
Prci1g2251 139 FunFam Histone H2A 8 131 - -
Prci1g2251 139 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2251 Prci-Chr1 43107466 43109103 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2251 K11251 - tcc:18613448 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2251 1 43107466 43109103 Prci1g2251 1 43107466 43109103 ECH