Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2247 ATGATGCTCAGAATTCGAAGTCGCGATGGCCTGGAGCGAGTTTCTGTTGATAACCCGCATGTCACTGTGGCCCAACTCCGATCTATAATCCAATCCCAGCTTCAAATTCCTACACACAATCAAACTCTCTCGACCAACCAAAACCTCCTGCTTGCTAAGACTCATGAAGATCTTCTCCGATTTACTGATATGTCTAACCCCGATACCCCTCTCTCTGCTCTCAATATCTCTCATGGGTCTATCGTATTTCTGGCCTACGAGGGTGAACGTAGGGTTGCTGGGCCAGCGTTCAGCCCCGCCGGCTCCTTCGGCCGCAAGATGACCATGGATGATCTAATCGCCAAGCAAATGCGAGTTGGACGACAGGAAAACCCGCATTGCGAGTTGGTTTCCTTCGATCGGGATTGTGCCAACGCGTTTCAGCATTATGTGAATGAGACCCTAGCTTTTGCAGTGAAAAGAGGGGGGTTCATGTACGGTACCGTCTCAGAGGAGGGTAAGGTTGAAGTGGATTTCATATATGAGCCACCCCAGCAAGGTTCGGAAGATAATTTATTGTTATTCAGAGACCCCGATGAAGAGAAGTTAGTAGAAGCTATTGCGGTAGGTTTGGGGATGAGGAAAGTAGGGTTTATATTCACGCAGACCATCAGTCAGGATAAAAAAGATTACACTTTGTCGAACAGGGAGGTTCTTCAGGCTGCAGAGTTACACGCAGAGAATGGCTTGAAGGAGTGGGTGACGGCTGTAGTGAAGCTGGAGGTGAACGAGGATGCTGGTGCGGATGTTCACTTTGAAGCCTTTCAGATGAGTGATACGTGTATTAAATTGTTCAAAGAAGGGTGGTTTGAAACAGAAATCGGTAACGATGACGATCCCAAGCTGTCAAAGATGAAGAAAGATGTAGTTGTCGGAGTTAAAGATACTAGAGAGGTTGATAATGACTTCTTTTTGGTGGTGGTAAAGATCTCTGATCATCAGGGTCCTCTTTCATCAACATTTCCCGTTGAGAACCGGAACACTCAAGTTGCGATGAAGGCGCTGAAGAATCATCTTGACCGTACAAAAAATCTTCCATTTGTGAAGAGAATATCTGATTTTCATCTTCTCCTTGTCCTAGCAAGGGTTTTAGACCTGGCTGCCGATGTTCCGGCGTTGACGGAATGTGTGCAGACACAGAGTGCTGTCCCGGAAGGTTACCAGATCCTGATTGAGTCCATGGCCAATGCGGCCTGA 1236 0.4717 MMLRIRSRDGLERVSVDNPHVTVAQLRSIIQSQLQIPTHNQTLSTNQNLLLAKTHEDLLRFTDMSNPDTPLSALNISHGSIVFLAYEGERRVAGPAFSPAGSFGRKMTMDDLIAKQMRVGRQENPHCELVSFDRDCANAFQHYVNETLAFAVKRGGFMYGTVSEEGKVEVDFIYEPPQQGSEDNLLLFRDPDEEKLVEAIAVGLGMRKVGFIFTQTISQDKKDYTLSNREVLQAAELHAENGLKEWVTAVVKLEVNEDAGADVHFEAFQMSDTCIKLFKEGWFETEIGNDDDPKLSKMKKDVVVGVKDTREVDNDFFLVVVKISDHQGPLSSTFPVENRNTQVAMKALKNHLDRTKNLPFVKRISDFHLLLVLARVLDLAADVPALTECVQTQSAVPEGYQILIESMANAA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2247 411 ProSiteProfiles MPN domain profile. 129 270 IPR037518 -
Prci1g2247 411 Gene3D - 1 100 - -
Prci1g2247 411 SUPERFAMILY Ubiquitin-like 1 88 IPR029071 -
Prci1g2247 411 FunFam NPL4-like protein 1 1 99 - -
Prci1g2247 411 CDD Ubl_AtNPL4_like 1 84 - -
Prci1g2247 411 Gene3D Cytidine Deaminase, domain 2 136 319 - -
Prci1g2247 411 Pfam Nuclear pore localisation protein NPL4 1 84 IPR024682 -
Prci1g2247 411 Pfam NPL4 family 156 281 IPR007717 -
Prci1g2247 411 CDD MPN_NPL4 118 373 IPR007717 -
Prci1g2247 411 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 1 87 IPR016563 GO:0006511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2247 K14015 - gmx:100811623 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2247 1 43067311 43071229 Prci1g2247 1 43067311 43071229 ECH