Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2235 ATGACAACTGGTCCAATGAGTGCATATGAACAAGTAGTGCTTGATAGTGAGGATGAGGAAATGCACGATAGCAAATTGGTGACTGTTTACAAAGGGTTATGGGACAAAAAATTCTTTGGAACCGTTAAAAATTCTAGAATGAAGTTTCACAAGAGGCATCTTGGACCAACTTCACCGAGTGAGCAAGCGGAGAAGGGAACAGCAAACACATGTGTTCATTCATTTGGGAAATCTGTTACTGGGGACAAAGAAACATCAACTGACGCTGAGAGCTCTGACAACAACAATCATCTACATCTATCTACAACATTGAGTCAAATACCCTCTCCAGAGATTGGGGATTTAACCCAAGACGATGCACTGGGATATGTGGATCGCTACTTGTCAGTCAGCAAAGTAGAATTATCTCCAGGAATTTGCCATAGAAAGGCTAGTAGAGAGAAATCACCTCCTCTGATAAGTGCAAGAGGAGCACAAAATTTGGCCAAGAAAATTCAAGTTCAGACCCATCATGAAGAAAAAAGACCCTTCGAATGGGTTGACGCTGGTCGAATGGACAGAGGAGCTGATATTTTTCATAAAACGATCGTGGCATCTTCAAATTGTGGAGTATGGGGACAGACATACACAAGAAGAAAACATAAAAGTGGTTATCCCGAGAACAGAGGAACCTGTAGCGCAGGTGATGGATGCGAAGAGAAGTTAGCTCAAGGACTAGGAACAGTTGCTGAGAATAATAGCTCTATGAAGGAGTTGGATGTTCAGTCAGATGCTGCAGGAAAGAATATTGACGCTTATTCTGGTGTGGGACATACGGAGGACACCTGTGATATTGGTTTAGACACCCAGGTAGCTGCTGAAGCTATGGAGGCCTTAGCTTATTTGCCCCCTCCTGCTGGCAGATGCACAAGGATCACATCAAGCAAAGAAAGAAAGAGGAATAATGATTCTGTAGATGGAGGAATTGTGAGATCCAAAAAGAAAAGAACTGGTTTAACAGCCAATCCATTCAAGTTGGTTCGTGATGCAGAACATATTGAGACGCCTTTGAGTTTACTTGGGATTGCTACGAAGAACAGTTTGAATTGTCAGGTTCAAGTGTGTCCGCAGCTGTCCACTAGCAGCAGTTTTTCAAGTCTTAATTCATGGCATTATCAGAAGGGACCAAGAGGAAAAAGAAAATGTCCTAATGTGCGAAGCTATCCAGATGCACCCAGAAATTGGGGTACTCAGTCTACAATAGTCAATGGAAATGAAAGTGATATCATCTCCATGGCAAATGGCAGAATTCAGGGAAATGTAGAAGGCGAAGACAATGAGAATGAAGCATGTTTACCTAACATCCACCTACTTTCTAGTGCCAAACGTATCGGTGCTCGGACGATCAGTGAAGGCAGAAAGGTTTCGAATGCCAATGCGACTTGCTATAAGCATCACAAAAGGCCAATTGACAAAAACCTACCAAAATCCTACCTTTTAAAGGAGCTTATTAGATTAGGTGTTTCTGAGCACGCAACAGATTTGATAGGGAAAAAACTTAGACAACGAAAAGATACGTCATATGTTCGAGTTCTGTTAAGCCAACATTTGGATGAGAGTATCATTAAGCAGCAAAAAAAGATCTTGGCACGGATGAACGTATCTATTGCATCAGGCCCAATAGAGGCTACACATTTTGTAGCAGACAAATTCACACGCACAAAGAATATGTTGGAAACCATGGCTCTTGGCAAGTTGGTGGTGACGCATTTATGGCTTGAGAGTTGCGGACAGGCAAACTGTCTTGTTGACGAGAAAAATTACATTCTAAGAGACGTGAAAAAGGAAAAGGAGATGGGATTTAGCATGCCTGTTTCTCTTGCTCGAGCAAGACGGCAACCACTTTTAACGGGCAGAAGTGTCTTCATCACCCCTCGCGTTAAACCTGATAACAAAGTGATCACAAGCTTAGTCACAGCTGCTCACGGTCAGTTGGTGGATGAATGCCAGATTTATACCGGCAAGAATGATGAAATGTTAGATAATGTGTTGATTATTTCTTGTGAAGACGACTTTGAAGTGTGTTGCCCGTTTCTTCAGAGAGGAATTACTGTGTGCAGTTCAGAGCTTCTTCTGAGTGGAATAGTGACCCAGAAACTGGAGCTTGAGAGAATCAAACAGCGGCACCAAATTGGATCCCTTGGATTGGAAATATTTGCGCATGTAGCAACTAGCAAATCTACTGTTGGGAAAATAAAGCGTTTGTGTATGGCAGACATCAACTCTTTGCATATCAAGTTGCCAGGAAAAGCCAGGATACATCAAGCCGTCGTTTTGGGAAGGTCTACAGAAGGCGTCGCAAACTGTTTGTAG 2352 0.4256 MTTGPMSAYEQVVLDSEDEEMHDSKLVTVYKGLWDKKFFGTVKNSRMKFHKRHLGPTSPSEQAEKGTANTCVHSFGKSVTGDKETSTDAESSDNNNHLHLSTTLSQIPSPEIGDLTQDDALGYVDRYLSVSKVELSPGICHRKASREKSPPLISARGAQNLAKKIQVQTHHEEKRPFEWVDAGRMDRGADIFHKTIVASSNCGVWGQTYTRRKHKSGYPENRGTCSAGDGCEEKLAQGLGTVAENNSSMKELDVQSDAAGKNIDAYSGVGHTEDTCDIGLDTQVAAEAMEALAYLPPPAGRCTRITSSKERKRNNDSVDGGIVRSKKKRTGLTANPFKLVRDAEHIETPLSLLGIATKNSLNCQVQVCPQLSTSSSFSSLNSWHYQKGPRGKRKCPNVRSYPDAPRNWGTQSTIVNGNESDIISMANGRIQGNVEGEDNENEACLPNIHLLSSAKRIGARTISEGRKVSNANATCYKHHKRPIDKNLPKSYLLKELIRLGVSEHATDLIGKKLRQRKDTSYVRVLLSQHLDESIIKQQKKILARMNVSIASGPIEATHFVADKFTRTKNMLETMALGKLVVTHLWLESCGQANCLVDEKNYILRDVKKEKEMGFSMPVSLARARRQPLLTGRSVFITPRVKPDNKVITSLVTAAHGQLVDECQIYTGKNDEMLDNVLIISCEDDFEVCCPFLQRGITVCSSELLLSGIVTQKLELERIKQRHQIGSLGLEIFAHVATSKSTVGKIKRLCMADINSLHIKLPGKARIHQAVVLGRSTEGVANCL 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2235 783 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 440 722 - -
Prci1g2235 783 MobiDBLite consensus disorder prediction 60 82 - -
Prci1g2235 783 CDD BRCT_MDC1_rpt1 533 596 - -
Prci1g2235 783 ProSiteProfiles BRCT domain profile. 555 603 IPR001357 -
Prci1g2235 783 MobiDBLite consensus disorder prediction 50 97 - -
Prci1g2235 783 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 513 603 IPR001357 -
Prci1g2235 783 SUPERFAMILY BRCT domain 526 619 IPR036420 -
Prci1g2235 783 Gene3D BRCT domain 625 724 IPR036420 -
Prci1g2235 783 Gene3D BRCT domain 511 624 IPR036420 -
Prci1g2235 783 CDD BRCT_PAXIP1_rpt6_like 628 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2235 Prci-Chr1 42972384 42976972 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2235 - K20780 pcin:129309319 1567.36