Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2227 ATGCAGCATCGCTGTGTGATCATCGTGGGAGCAGGTCCTTCTGGCCTCTCTGTGGCGGCATGCTTAACACGACGATCTATTCCCTTCATAGTCCTCGAAAGAGACGACTGTTTCGCTTCTCTATGGTTCAAGTATTCCTACGATCGCCTTCACCTTCACCTCAGAAAGCAATTCTGTGAGCTTCCTCACATGTCGTTCCCACCCTCTTATCCTCAGTACGTACCCAAGAAGCAGTTCCTACAGTACCTCAACGACTACGTGTCACACTTCAGAATCAGTCCTCTCTACGGCAGAACTGTGGAGAGAGCGAAGTACGACGAGGGTGGCCAGAAATGGAGGGTGCAAGCTAGGAATGGGGATTCCGGTGAGGTTGAGGAATATTCCGGGAGGTTTCTGGTGGTGGCCACTGGAGAAAACAGCGAGCCTTTCGTGCCGGAGGTGGAGGGGTTAGGTGGGTTCAAAGGGAGAGTGATCCATTCAACTGGGTTCAAGTCAGGGAAGGAATTCAAAGACGAGCATGTTCTGGTGGTTGGATCCGGTAATTCAGGCGTGGAAATCGCATTGGACCTGGCCAACCATGGAGCCAAAGCTTCCATCCTGATTCGAAGCTCGATACATTTGCTATCAAGAGGGATGACGAATCTGGGATTGATGCTGCTGAAATATTTGCCTTTGAACATAGTGGACTCACTGTTGGTGATTCTCAGCAGAATGGTTTATGGGGATGTTTCAAAATTTAGGATCAAGAGGCCTCAGGAAGGTCCTTTCTCCATGAAGATCAAGTATGGCAAGTATCCAGTTATTGACGTTGGAACCTACGAGAAGATCAAATCTGGGGAGATACAGGTGATTCCAGAGGAAATAGAAAGCGTGGATGGCAACGACGTCGTATTCAAAAATGGCAGGTCGCAACCATTTGACTCCATCGTTTTCTGCACCGGCTTCAAAAGATCAACGCACAAATGGCTGAAGGGCAATGATTCTCTCTTGAATGATGATGGGATTCCAAAGCTTAATTACCCTAATCATTGGAAGGGAAAGAATGGCTTGTATTGCGTTGGGCTATCAAGGAGAGGCTTTTATGGGGCTTCCGCAGATGCCGAAAATATATTATCTCAATTCTCAATTGTGTAA 1134 0.4771 MQHRCVIIVGAGPSGLSVAACLTRRSIPFIVLERDDCFASLWFKYSYDRLHLHLRKQFCELPHMSFPPSYPQYVPKKQFLQYLNDYVSHFRISPLYGRTVERAKYDEGGQKWRVQARNGDSGEVEEYSGRFLVVATGENSEPFVPEVEGLGGFKGRVIHSTGFKSGKEFKDEHVLVVGSGNSGVEIALDLANHGAKASILIRSSIHLLSRGMTNLGLMLLKYLPLNIVDSLLVILSRMVYGDVSKFRIKRPQEGPFSMKIKYGKYPVIDVGTYEKIKSGEIQVIPEEIESVDGNDVVFKNGRSQPFDSIVFCTGFKRSTHKWLKGNDSLLNDDGIPKLNYPNHWKGKNGLYCVGLSRRGFYGASADAENILSQFSIV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2227 377 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 6 373 - -
Prci1g2227 377 PRINTS FAD-dependent pyridine nucleotide reductase signature 173 191 - -
Prci1g2227 377 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Prci1g2227 377 Pfam Pyridine nucleotide-disulphide oxidoreductase 7 204 - -
Prci1g2227 377 PIRSF FMO 1 358 IPR000960 GO:0050660|GO:0050661
Prci1g2227 377 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Prci1g2227 377 Gene3D - 2 375 IPR036188 -
Prci1g2227 377 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
Prci1g2227 377 PRINTS Pyridine nucleotide disulphide reductase class-II signature 169 193 - -
Prci1g2227 377 SUPERFAMILY FAD/NAD(P)-binding domain 3 274 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2227 Prci-Chr1 42926450 42931430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2227 K11816 - gmx:102668138 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2227 1 42926450 42931430 Prci1g2227 1 42926450 42931430 ECH