Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1514 ATGCATTCACAATCTCAAGCCATGTTCTTCACTCTGAGAAGCTCATCACCAACCTTCATCCTCTTGCTATCTCTGACACTTTCTCTTTCTTTATCCTCTGCAATCCCACACTTCACATCTTGCTTGACCCACCATAACATCAACAACTTCACCAGATTCACTGACCAATCCTTTATACACAGTAATGACTACTTCAGAATCCTCAACTTCTCCATCCAGAACCTTCGCTTTGCACAGCCCGACATCCCAAAGCCTATAGCCATTGTTCTGCCAGAGAGCTTGGAGCAGCTGAGGAACAGTGTGGTGTGCAGCAGAGAATCCTCTGTAGACATCAGAGTGAGATGTGGCGGACATAGCTATGAAGGGACATCCTCTGTGGCCAATGGTGGAGCTCCATTTGTCATCATTGACCTCATGAACCTAAACCATGTTCATGTGGACATGGAGGCTGAGATGGCATGGGTTGAAGGTGGGGCCACCCTGGGAGAGACCTACTATGAAATCTCTCGAGCCAGCAAGGCCCACGGGTTTTCAGCTGGGTCATGCCCGACCGTGGGAGTAGGTGGGCATATTGGGGGAGGTGGGTTTGGGCTTTTATCAAGAAAATATGGCCTTGCAGCAGATAATGTAGTGGATGCACTTCTCATAGATGCAGATGGGAATTTACTTAACAGACAAGAAATGGGAGAAGATGTGTTTTGGGCTATCAGAGGAGGTGGGGGTGGTGTTTGGGGGATTATATATGCCTGGAAAATCAAATTACTAAAAGTGCCAGAAGTTGTAACTAGTTTCATAGTCTCAAGAACAGGCACAAAAGATCAAGTTCTGAAGCTAGTTAACAAATGGCAATATGTAGCACCAAATTTGGAAAATGACTATTACTTGTCTTGCTTTGTTGGTGCAGGCTTGCCTGAAGCTAAAACTGCAGGCTTATCTGCAACTTTTAAAGGGTTCTATCTAGGTCCTAAGGACAATGCTAGATCTGTCATAAACCAGGTTTTTCCTGAACTCCGCATTAAGGAAGAAGATTGCAAAGAAATGACTTGGATTGAATCCGTAGTTTTTTTCTCTGGCCTAACAAATGGAGCCATAGTGTCAGACCTGAAGAACAGGTATCTGCAAGAAAAGGAATATTTCAAAGCCAAATCAGATTTTGTTAAAAGTCCTATTCCTCTGGTTGGGATAGAAACTGCTTTAAACATACTTGAGAAAGAGCCAAAAGGGTATGTCATTTTGGACCCTTATGGAGGAATGATGCACAATATAAGCAGTGAAGCCATAGCTTTTCCTCACAGAAAAGGCAATCTCTTCACCATCCAGTACCTGATATATTGGAAAGAAGCAGATAATGACAGAAGTAGTGAATATACTGAGTGGATAAGAGAGTTCTATGATTCAATGACTTCATTTGTTTCATGCGTTCCAAGAGCTGCATATATCAATTACATGGACTTTGACCTTGGAGTAATGGTGGAACCCATTAATACAAAAGAAGCAGAGGAACAAGCCAGAGTTTGGGGTGAAAGCTACTTCTTGAGAAATTATGACAGACTGGTTAAAGCCAAGACTCTGATTGATCCCAACAATGTTTTCACTAATCAACAAGGCATTCCTCCATCGTCGTCTTCTTCCATTAGTTCAATGTGA 1647 0.4287 MHSQSQAMFFTLRSSSPTFILLLSLTLSLSLSSAIPHFTSCLTHHNINNFTRFTDQSFIHSNDYFRILNFSIQNLRFAQPDIPKPIAIVLPESLEQLRNSVVCSRESSVDIRVRCGGHSYEGTSSVANGGAPFVIIDLMNLNHVHVDMEAEMAWVEGGATLGETYYEISRASKAHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLIDADGNLLNRQEMGEDVFWAIRGGGGGVWGIIYAWKIKLLKVPEVVTSFIVSRTGTKDQVLKLVNKWQYVAPNLENDYYLSCFVGAGLPEAKTAGLSATFKGFYLGPKDNARSVINQVFPELRIKEEDCKEMTWIESVVFFSGLTNGAIVSDLKNRYLQEKEYFKAKSDFVKSPIPLVGIETALNILEKEPKGYVILDPYGGMMHNISSEAIAFPHRKGNLFTIQYLIYWKEADNDRSSEYTEWIREFYDSMTSFVSCVPRAAYINYMDFDLGVMVEPINTKEAEEQARVWGESYFLRNYDRLVKAKTLIDPNNVFTNQQGIPPSSSSSISSM 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1514 548 Pfam FAD binding domain 85 223 IPR006094 GO:0050660
Prci1g1514 548 ProSiteProfiles PCMH-type FAD-binding domain profile. 81 257 IPR016166 GO:0071949
Prci1g1514 548 Gene3D - 145 539 IPR016169 -
Prci1g1514 548 SUPERFAMILY FAD-binding/transporter-associated domain-like 56 258 IPR036318 GO:0050660
Prci1g1514 548 Pfam Berberine and berberine like 478 538 IPR012951 GO:0016491|GO:0050660
Prci1g1514 548 PANTHER OS08G0158400 PROTEIN 33 540 - -
Prci1g1514 548 Gene3D - 37 141 IPR016167 -
Prci1g1514 548 Gene3D - 260 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1514 Prci-Chr1 34171900 34173831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1514 5 539 Miscellaneous Gene Families AT4G20820 42.541 8.30e-133 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1514 - - gmx:100790761 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g1514 1 34171900 34173831 Prci1g1514 1 34171900 34173831 ECH