Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1488 ATGTCTAAACCACAAAACGATCCACTTCTGCAACTTGAAACAACATGTGGATCACTTCTGTATGAACTTCAGATAATATGGGATGAAGTTGGGGAGCCCGACACTGAAAGAGATAAAACGTTGCTTGAGCTCGAACGAGAGTGCCTAGAGGTTTACAGAAGAAAGGTGGATCAGGCAAATAGGAGTAGAGCCCAATTGAGGCAAGCAATTGCTGATTATGAAGCAGAACTCGCAGCCATCTGCTCAGCAATGGCAGAACGGCCTGTACATATTAGGCAGTCTGATCAAAAGGCTGGGAGTTTAAAACAAGAGCTTTCGAGAATACTTCCAGAGCTTGAGGAGATGCGGAAACGGAAGTCTGACAGAAGAGATCAATTTAAAGACGTCCAAGAGAAGATACTAAACATCTCGAATGAGATCTACGGGTCCAAAGAATATATTTCTGCCAAGACGGTAGTAGATGAATCTGACTTGTCGTTAAGAAAGCTTGAAGAATTGCATGGAGAGCTGCAGACACTACAAAAAGAGAAGATTGAACGCCTCAAGAAGGTTCAGGACCACCTATGCACTTTAGAATCTCTTTGTTTGGTGCTTGGTTTGGATTTTAAGCAGATAGTCAGCAATATCCATCCGAGTTTAGGAGATACTGAAGGGCCTAAGAGTGTAACAAATGATACAATCCAGCAGTTGGCAGATGCCATACAAAATCTGCGGCAAGTTAAACTGCAGAGAATGCAGAAGCTCCAAGATCTCGTAACAACAATGTTGGAGCTCTGGGACTTGATGGATACACCTATCGAAGAGCAACAGATGTTTCAAAGTGTTACTTGTAATCTTGCTGCTTCAGAATATGAAATAACTGAGCCTAACACCTTGTCTGTGGAATTCATCAATTATGTGGAGGCGGAAGTATGCAGGTTAAACGAATTAAAAGCAAGCAAAATGAAAGAGCTTGTATTGAAGAAGAGAACGGAGCTAGAGGAGATATGTAGAAAGGTGCATATGGTTCCAGTAGTAGACAATGCAATGGAATTTGCTGTTGAAGCTATAGAGTCAGGATCCGTGGACCCAGCTTACGTGCTTCAACAAATTGAGCTTCAGATTGCCAGGGTCAAAGAAGAAGCTTTAGGTAGAAAAGAAATACTTGAAAAGGTTGAGAAGTGGTTGGCAGCTTGTGATGAGGAGTCCTGGCTTGAGGAGTACAACAGGGATGACAATCGGTACAATGCTGGGAGAGGTGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCTCGTGCCTTGGTTAGTAAACTTCCAGCAATGGTAGATGCTTTGGCTTCAAAAACTGTTGCATGGGAAAAAGAAAAAGGCATGGAATTTACTTATGATGGTATCCGTCTACTTTCTATGCTCGAAGAATACACCATATTACGGGAAGAGAAAGAGCAAGAACGTCGCAGGCAGAGGGATCTGAAGAAACTTCAGGGACAATTAATTGCGGAACAGGAGGCACTTTATGGGTCAAAACCAAGCCCTTCGAAGGCTCAGGGCCCTAAAAAGGCACCTAGGATGTCAACGGGAGGCGCAGCTAGTAGAAGAGTTTCCCTTGGAGGGTCAATGGTTCAAACTCCCAAAGCAACTCAGTCACGCCCCATGAGGAAGACTGACATTGCCCACCATTTTGACAATCACCTGGATGATTCTCTTTCATCTTTATCATCAGTTAGGAGAGGATTGGATGTTACCGGTGGTTCTGTGAAAAAGCAATCATTTGGCGGTGGTGCAACTGGTGGCGGAGGCCGTGACATACATTCTCCGATGACGCGACAACCTTTCTCTCCCATTGCTTCAACGTTATCATCAAAAGCTAACATGAAAACCCCCGCAGACGAACTCATCAACACACAAAGTGAGAAGTTGCAGAAAGCAGTTGCACCTAACGCCACAATGCCATTCACTACACCGTCCAAGACAGCTCCGATTATGGCAGATGAAGAGAACAGAACTCCGAAGACAGTAATGCCCATTCCTTACCCATCCACACCTTCTACCGTGTCAGCTCCGATGAACATGGCCGTCACACCGGCTCCTCCTGCTGCTGCTCCGGTCCTTCGTGCAGGTGACTTCGCTCCAGAGATTGAATACTCTTTTGAGGAAAGAAGGCTCGCTTTCATTCTTTCATCTTGA 2166 0.4488 MSKPQNDPLLQLETTCGSLLYELQIIWDEVGEPDTERDKTLLELERECLEVYRRKVDQANRSRAQLRQAIADYEAELAAICSAMAERPVHIRQSDQKAGSLKQELSRILPELEEMRKRKSDRRDQFKDVQEKILNISNEIYGSKEYISAKTVVDESDLSLRKLEELHGELQTLQKEKIERLKKVQDHLCTLESLCLVLGLDFKQIVSNIHPSLGDTEGPKSVTNDTIQQLADAIQNLRQVKLQRMQKLQDLVTTMLELWDLMDTPIEEQQMFQSVTCNLAASEYEITEPNTLSVEFINYVEAEVCRLNELKASKMKELVLKKRTELEEICRKVHMVPVVDNAMEFAVEAIESGSVDPAYVLQQIELQIARVKEEALGRKEILEKVEKWLAACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARALVSKLPAMVDALASKTVAWEKEKGMEFTYDGIRLLSMLEEYTILREEKEQERRRQRDLKKLQGQLIAEQEALYGSKPSPSKAQGPKKAPRMSTGGAASRRVSLGGSMVQTPKATQSRPMRKTDIAHHFDNHLDDSLSSLSSVRRGLDVTGGSVKKQSFGGGATGGGGRDIHSPMTRQPFSPIASTLSSKANMKTPADELINTQSEKLQKAVAPNATMPFTTPSKTAPIMADEENRTPKTVMPIPYPSTPSTVSAPMNMAVTPAPPAAAPVLRAGDFAPEIEYSFEERRLAFILSS 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1488 721 FunFam 65-kDa microtubule-associated protein 6 368 501 - -
Prci1g1488 721 MobiDBLite consensus disorder prediction 495 545 - -
Prci1g1488 721 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 556 IPR007145 GO:0000226|GO:0008017
Prci1g1488 721 Coils Coil 112 132 - -
Prci1g1488 721 Coils Coil 156 176 - -
Prci1g1488 721 MobiDBLite consensus disorder prediction 529 543 - -
Prci1g1488 721 MobiDBLite consensus disorder prediction 576 600 - -
Prci1g1488 721 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 513 - -
Prci1g1488 721 Coils Coil 49 83 - -
Prci1g1488 721 Coils Coil 460 490 - -
Prci1g1488 721 Gene3D - 367 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1488 Prci-Chr1 33700382 33706550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1488 11 520 EF-hand Containing Proteins AT5G62250 59.653 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1488 K16732 - cave:132183119 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g2003 14 27487692 27493056 Prci1g1488 1 33700382 33706550 CCT
Prci14g2003 14 27487692 27493056 Prci1g1488 1 33700382 33706550 ECH
Prci1g1488 1 33700382 33706550 Prci1g1488 1 33700382 33706550 ECH