Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0630 ATGGAGGGATCGTCAATGGTGAGAAGTGATGATGAGAAGAAGAGATCAAGATGGATAGAGGAAGTGGAGAAAGGAGGAAGGATAGCGGCGCCGATGGTGGCGGTGGCGGTGGCGCAATATCTGTTGCAGGTGGTATCGCTGATAATGGTGGGACACTTAGGACAGCTCTCTCTTGCCAGTATCGCCATTGCTACTTCTCTCACCAACGTCTCTGGCTTCAGTCTCTTGTCAGGAATGGCAGGTGGATTAGAAACCCTATGTGGCCAAGCTTACGGAGCAGAACAGTATCACAAACTAGGGATCTACACTTACACTGCAATTATCTCTCTCTCTCTGGTTTGTGTTCCAATCTCTCTTGCATGGAGTTTCATGCACAAATTACTCCCACATTTAGGTCAAGACCCAGTGATCTCCATGGAAGCTCGAACTTACTCCATGTGGCTCATACCTGCACTGTTCGCTTCTGCAATTCTCAAGCCTCTCTCCAGATATTTCCAGACTCAGAGTCTGATCTTTCCCTTGCTTTTAAGCTCCTCTTTAGCTTTGTGTTTGCATGCAGTTACGTGTTGGAATCTGGTGTTCAAGTTAGAGCTAGGGCTTGTTGGTGCTGGAATTTCTTTTAGTGTTTGTGCTTGGTTCAACGTGATTCTTCTGGTGTTGTATATGAAGTATTCTTCTGCATGTGAGAAGACTCGAATCGGTTTTACGAAGCAAGGTTTGCTTGGCATGTCAGAGTTCTTCCGTTTTGCTGTTCCATCTGCTCTTATGGTTTGCCTAAAGTGGTGGGCATGCGAGTTGTTTGTATTACTGGCCGGACTCTTTCCAAATCCAAAGTTAGAGACATCGGTCTTTTCTATATGCCTTACAATTTCAACTTTGCACTTCACCATACCATATGGGTTTGGCGCTGCTGCTAGTACAAGAGTAGCGAACGAGGTGGGTGCAGGGAACGTGGAAGCAGCGAAAGTAGCAGTGGGAGTGTGGATGATAGTGGGAGTGACGGAGGGAGGCATAGTGAGCGGAACCCTATGGGGACTCCGACACGTGTTGGGCTATGCCTTCAACTCCGATCACGAGGTTGTCCGCTACGTGGCTTCTATCACCCCTCTCTTGTCTCTCTCCATCTTCTTCGACTCCTTCCAGGCTGTTCTTTCTGGAGTCGCCCGAGGATGTGGGTGGCAGCACGTGGGAGCCTACGTCAACATTGGAGCATTTTATGTCGTCGGAGTTCCTGTCGGAGCCTTGCTTGCCTTCCCTGCTCATTTCAGAACCAAGGGCCTCTGGATTGGCCTCCTCTCTGGCTCTCTCCTCCAATCTTCCCTCCTCTCTCTCATCACTTATCTCACTAACTGGTCTTCACAGGCAAAGGGGGCAAGGCAAAGAATATTTGATTCCAGATCTCCGGATGCGAATGAAACAGTGAACCATCCTTAA 1434 0.4868 MEGSSMVRSDDEKKRSRWIEEVEKGGRIAAPMVAVAVAQYLLQVVSLIMVGHLGQLSLASIAIATSLTNVSGFSLLSGMAGGLETLCGQAYGAEQYHKLGIYTYTAIISLSLVCVPISLAWSFMHKLLPHLGQDPVISMEARTYSMWLIPALFASAILKPLSRYFQTQSLIFPLLLSSSLALCLHAVTCWNLVFKLELGLVGAGISFSVCAWFNVILLVLYMKYSSACEKTRIGFTKQGLLGMSEFFRFAVPSALMVCLKWWACELFVLLAGLFPNPKLETSVFSICLTISTLHFTIPYGFGAAASTRVANEVGAGNVEAAKVAVGVWMIVGVTEGGIVSGTLWGLRHVLGYAFNSDHEVVRYVASITPLLSLSIFFDSFQAVLSGVARGCGWQHVGAYVNIGAFYVVGVPVGALLAFPAHFRTKGLWIGLLSGSLLQSSLLSLITYLTNWSSQAKGARQRIFDSRSPDANETVNHP 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0630 477 Pfam MatE 31 190 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci1g0630 477 Pfam MatE 252 414 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci1g0630 477 CDD MATE_eukaryotic 39 456 IPR045069 GO:0042910|GO:1990961
Prci1g0630 477 PANTHER MULTIDRUG RESISTANCE PROTEIN 14 451 - -
Prci1g0630 477 NCBIfam MATE family efflux transporter 31 428 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0630 Prci-Chr1 6484759 6491399 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0630 K03327 - gmx:100808206 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0630 1 6484759 6491399 Prci1g0630 1 6484759 6491399 ECH