Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0464 ATGATGAAGCATGGACTAGCATTAGCGCTTCTTTTGGTTTCCTTTTTCATCTTAAATTCCTTATCGTTTTCTTCAGTTCAGCCTTTCTCGGTGGACGGCACGGTATTGCAATTGGATGAATCCAACTTCGATTCCGCCATATCGACGTTCGATCGTATCTTGGTTGACTTCTACGCTCCATGGTGTGGTCACTGCCAGCGTCTCTCTCCCGAGCTAGATGCAGCTGCACCTGTGCTTGCAGCCTTAAAAGAACCCATAGTCATTGCAAAAGTTGATGCAGACAAGTTTTCCCGTCTTGCAAAAAAATTTGATGTTGATGCTTATCCTTCCCTTATGCTGTTTGTACATGGTGTACCCACAGACTATCGTGGACCAAGGAAAGCAGATCTTCTAGTTCGTTATCTAAAGAAGTTTGCTTCTCCAGATGTGACCATTCTTGATTCAGATTCTGCTATTAATAACTTTGTTGAAGCATCCGGCGCTTTATTCCCCATATTTATAGGTTTTGGGTTGAGTAGTTCTATGATCGAAAAGTCATCCATGAAGTATAAGAAAAATGCATGGTTTTCCGTGGCAAAGGATTTCTCAGAGGATGTCATGGGATTGTATCATTTTGATAGGGTTCCTGCTTTGGTTTCCATTAATCAGGATTACAATGAGCGTAGCACTGTTTATGGCCCCTTCGAAGAGAAGTCTTTGGAAGATTTTGTGAAACAAAACCTGATTCCTTTAGTGGCGCCTGTATCCTTTGACACACTAACGTTGATGAAAAGTGATGGGAGGAAAATTATCTTAACAATTTTTGAGGATGAGGATGAAGAAAGATCAAAGAAATTCATTAAACTATTGAAGAAGGCTGCATCTACAAACCGTGACTTAATATTTGGTTGTGTTGGTGTTAATCGGCTGGAAGATTTTGCTGAAAAATTTGACCTCAATAAGTTACCAAAAATGGTTATTTGGGATGGAAGCGATGAGTACCTATCTGTTACTGGTTCAGAAAGCATTGATGAGGTGGATCAGGAAACTCAAATCAGGAAATTAGTAGAAGGATACAGGGAAGGCAGAACCACACAGAGAAGACTCAGTGGCCCATCGCTGATGCGGGCGATGAAAAAATCTCCTGCCATCAAAATCTTGTTTGTCTTTGTTGCTGTGATTGTAATATTGATGCTTCTTCTTCTTATCTTTTATGAAGGAGATGATGAGTTCCAGAAGTTACAAAGTGAAGACCAGGTTGATCATGCTAGCAGCTCTGCCTTAGAAGCTGAAAGCAAGGAGTATAAACCTGAAGACAAGGAAGATTAA 1308 0.406 MMKHGLALALLLVSFFILNSLSFSSVQPFSVDGTVLQLDESNFDSAISTFDRILVDFYAPWCGHCQRLSPELDAAAPVLAALKEPIVIAKVDADKFSRLAKKFDVDAYPSLMLFVHGVPTDYRGPRKADLLVRYLKKFASPDVTILDSDSAINNFVEASGALFPIFIGFGLSSSMIEKSSMKYKKNAWFSVAKDFSEDVMGLYHFDRVPALVSINQDYNERSTVYGPFEEKSLEDFVKQNLIPLVAPVSFDTLTLMKSDGRKIILTIFEDEDEERSKKFIKLLKKAASTNRDLIFGCVGVNRLEDFAEKFDLNKLPKMVIWDGSDEYLSVTGSESIDEVDQETQIRKLVEGYREGRTTQRRLSGPSLMRAMKKSPAIKILFVFVAVIVILMLLLLIFYEGDDEFQKLQSEDQVDHASSSALEAESKEYKPEDKED 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0464 435 SUPERFAMILY Thioredoxin-like 249 341 IPR036249 -
Prci1g0464 435 Pfam Thioredoxin 35 137 IPR013766 -
Prci1g0464 435 PRINTS Thioredoxin family signature 104 115 - -
Prci1g0464 435 PRINTS Thioredoxin family signature 53 61 - -
Prci1g0464 435 PRINTS Thioredoxin family signature 61 70 - -
Prci1g0464 435 PANTHER PROTEIN DISULFIDE ISOMERASE 13 364 - -
Prci1g0464 435 FunFam Protein disulfide-isomerase 5-2 24 139 - -
Prci1g0464 435 CDD PDI_a_family 36 135 - -
Prci1g0464 435 Gene3D Glutaredoxin 231 366 - -
Prci1g0464 435 SUPERFAMILY Thioredoxin-like 27 138 IPR036249 -
Prci1g0464 435 ProSiteProfiles Thioredoxin domain profile. 17 140 IPR013766 -
Prci1g0464 435 MobiDBLite consensus disorder prediction 409 435 - -
Prci1g0464 435 Pfam Thioredoxin-like domain 192 329 - -
Prci1g0464 435 ProSitePatterns Thioredoxin family active site. 54 72 IPR017937 -
Prci1g0464 435 Gene3D Glutaredoxin 26 150 - -
Prci1g0464 435 MobiDBLite consensus disorder prediction 420 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0464 Prci-Chr1 4355091 4359749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0464 K09580 - gmx:100791778 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0464 1 4355091 4359749 Prci1g0464 1 4355091 4359749 ECH