Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0294 ATGGCGAAAGGGGTCTCTCTTGATGCAAGGTTCAGTAAAGCGTGGTACCAAGAAATCATCCAAATCAAATTCAAGGGACACTCTGTTGACGGTTATAGATCGTTGGAAGTCTCTTTCAACCATGCGTCTCGGACCACCACCGTTACGGCTACCGCCAAGTCGGGCCCAAACAAGTTGGCTCCGGCTGTGGCGCTGCCCCTGTCCGCCGCTGTAGAATTACTGCCTCCAGTGCGAGAAGTTGCCATTTCAGAACGATCGAGTGTGTTACTTCGAAAAATTCAGCTCTGTTGCTTTGTATATGACTATTCGGACAGTTCGAAGTCGGTTCGTGAAAAGGAAATAAAACGCCAAACCCTTGATGAGCTACTGGATATTATACAATATGGATCATTCAAATTCGACGAACTTATGCAAGAACAGCTTATTGAGATGGTTTCGGTTAATATTTTCCGCTGTTTGCCACCAGCATCCCATGAAATTACTGGGACCGAAGCTTTTAATCCTGAAGAGGACGAAAGATATCTAAATTTATCGTGGCCCCATTTGCAGCTTGTGTATGAAATTCTACTGAGGTACATTGTGTCATTTGAGATTGATACAAAGACTGCCAAGCGCTACATTGATCATACATTTGTTTTAAAATTGCTGGATCTGTTCGATTCGGAGGACCCACGAGAGCGTGAGTATTTGAAAGCCATTCTTCACCGAATATATGGGAAGTTCATGGTGCACAGGCCTTTCATAAGGAAAGTAATAAATAATATACTTTGTAGGTTTATATTTGAAACAGAGAGGTATAATGGTATAAACGAGCTTTTGGAGTTTCTGGGTAGTGTCATAAACGGATTTTCATTGCCAATGAAAGAAGATAATAGATTGTTTCTATTCCGAGCGCTAATACCACTTCACAAGCCAAAATGTTACGCCACATATCATCAACAACTGTCTTATTGCATCACTCAGTTTGTTGAGAAGGACTACAGATTGGCAGAACATGTGATCAGAGGGTTACTGAAGTACTGGCCAGTCACAAATTGCCAGAAGGAGGTCCTTTTCCTTGCAGAACTAGAAGAGATTCTGGAGGCAACTCAGTCTGCAGAATTTGAACGGTGCATGGTCCTTCTTTTCAGGCAGATTGGTCGCTGCCTTAACAGCCCTCACTTCCAGGTTGCTGAAAAAACGCTGGGCCTGTGGAACAATGAGCACATAGTAAGCTTAATAGCTGAGAATAGAGATGTAATATTTCCAATAATCTTGGAGGCAGTGGAGAAGAACATGAAAGGGCATTGGAACCAAGCAGTTCTTGAGCTCACAGGCAACGTGCGTGGCATGTTACTGGAAATGGATTCTAAGCTCTATGAAGACTGCCAGAGCCTGTACTTAGAGAAGGAATCAATGGCTGCAGACTTGGAAACTCAGCGTGAGTTGACATGGAAGAAGTTGGAAGCAGTGGCTGCACAATCTGAGAGTGTGAGTGATCATATTCATATGGTTTTGGTTAATTAG 1506 0.4316 MAKGVSLDARFSKAWYQEIIQIKFKGHSVDGYRSLEVSFNHASRTTTVTATAKSGPNKLAPAVALPLSAAVELLPPVREVAISERSSVLLRKIQLCCFVYDYSDSSKSVREKEIKRQTLDELLDIIQYGSFKFDELMQEQLIEMVSVNIFRCLPPASHEITGTEAFNPEEDERYLNLSWPHLQLVYEILLRYIVSFEIDTKTAKRYIDHTFVLKLLDLFDSEDPREREYLKAILHRIYGKFMVHRPFIRKVINNILCRFIFETERYNGINELLEFLGSVINGFSLPMKEDNRLFLFRALIPLHKPKCYATYHQQLSYCITQFVEKDYRLAEHVIRGLLKYWPVTNCQKEVLFLAELEEILEATQSAEFERCMVLLFRQIGRCLNSPHFQVAEKTLGLWNNEHIVSLIAENRDVIFPIILEAVEKNMKGHWNQAVLELTGNVRGMLLEMDSKLYEDCQSLYLEKESMAADLETQRELTWKKLEAVAAQSESVSDHIHMVLVN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0294 501 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 54 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Prci1g0294 501 SUPERFAMILY ARM repeat 87 464 IPR016024 -
Prci1g0294 501 PIRSF PP2A_B56 28 500 IPR002554 GO:0000159|GO:0007165|GO:0019888
Prci1g0294 501 Gene3D - 82 484 IPR011989 -
Prci1g0294 501 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 74 485 IPR002554 GO:0000159|GO:0007165|GO:0019888
Prci1g0294 501 FunFam Phosphoprotein phosphatase, putative 83 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0294 Prci-Chr1 2813991 2820535 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0294 K11584 - qsa:O6P43_004987 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0294 1 2813991 2820535 Prci1g0294 1 2813991 2820535 ECH