Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0240 ATGATGAACTTGGGAGAAAAAATTTTTACTCTGGAAGAAGAACAAGTTCAGATGAATGGTTCTTGGGTACCTGTCACTCCTGAGAAGCCAGTTCAAATAAGATCTGAGACAATAACAGCTGGCTGGCAGGAAAACCAAATGGTAGGAGGGAATTTGAAAAAGTTAACTATTCCTGGGAGTGGCTACATGAAAGAGATGCTGCAGTATAATGGGTTAGATCAGAATGTCCATCTGGTGGGACAGACTGAAGAGTACAATTATTTTGATGGAGGTTCTTCCAGAGCCGGTATCATCAATCACAGTGATGTGGACTTTGACAGCAATATATTGAATACTTTGGAGCTTCTCTTCATGAAGGATGCAAGTAACATTGCCCATGATGACAGAAATTTAAGTGAGAGTATAAGCATGGCTGTAAGAACACCAGTGCTACCAAAATTTCATCCTCACACAATCAGTAATGGGAGAGATTTCAATGCAGATGGTTTCACTGTCAAAGAAAACAATAATTCAGCTACAGTGTACACAGATGCAAATCTTTTGGTTCCAAATAGGAATTCTGAATGTGACAGCAGCGGCTTATATGATTTTCTCAACCATGACATTCACTGCTCATTCTCAAGCCTGTTGAATAGTAGCCTATCTGAGTCAGAGATACCCAACGGTGGTTTTTACGTACCTTGCATACCCAGTTTCGATCAAAACTCTGCATCTGTCACAGAAGCTGATGATGTCTTTAGTTTAACCAACTCCTTCCAATCAGCACCAGAAACAATGGATCAGTTCAATCAGTTTACAGAAAGTCAGTTTGTGAAGCATGTAACAGCTGAAAGCCAAATTCAGGTGACAGACAGACCAGACAACTTGGTTGCATCCACAGAAAACGATCACCGTGAATATTGTGATGGACTTCTACAGCATATAGTAGATACATCTGCAGCAGCTTCTAAATCACCCAACAAAATTGAGGGTTCTGAAAATGATTTTCGTAGTGGGAGTGGCCTGGATATTGATCTAAATAAGACACCTGAGCAGAAACCACCTAAACGAAGAAAGCATAGGCCAAAGGTAATTGCAGAAGGCAAGCCCAAAAGAACTCCAAATCCTGCAACTAGAAAGAAGAGAGAATATATGGAGAATCCACCCCAAAAGAGGAAGTATGTACGAAAGAATGTGCCAAAAGAAGCAACGTCACAAGCTGATGTTATAGAGAATTTGGGTTGTGGGACTGCAACTAGGCCCCAAAAGAGGAAGTATGTACGAAAGAATGTGCCAAAAGGAGCAACACCGCGGGCTGATGTTATGGAGAATTTAGGTTCTGGGACTGCAGCTAGAAAATCTTGCAGGAAAGCTCTAGATTTTGATTTAGAAGAGAGTAGATGCAAAGAACAGAACAACATAGTTGGTCGGCAGGAGATCCAAGGCAGAAATGGGTTGCTCACCGAGTTTCTCAGTGCAGCAAGGGTATGTTATGATACAAACTCAACTTTGCTTGTCAGCAACCAGGATGGTTTTATGATAGAAAACCAGCAACCCAGAAGCACAGATGATGGTGCTTTTTTATTGCATCAGAGGCTAAGTGACAGATGCTTGCCAAAAGAACAAGCTAATGTACCCTTGCCAGCAAATACAGAAATGGAGATTAAAAATTTGTTAGAGACTGAGAAAGGTCCAGCTCAAGGCAATGCTGGATTTTGCAAAGAAAGAAACAATGGATGCTTGGAGCAATGCATTCACGCAGATGGAATTGACAATGTTCTCTTGCAATCAGAGATATGTCTAGAGATCCATCAAAGCACCAAAGTACCAATGTCCCAAAATGACCTCCAGTTGGTGCCAAACATTTTGTCCAATTGCATTGAAGGAAGCAGTTTGAAGAGAAAATATTGCCATGCTGATGAGAAGCAATATGTCTCTGCAACAAATCCACTTGATTCTTCCTTATTGCACCAGGAGATTTTCCAGGTGGATGAAAATTGTAACGGCACACCTCTGGATAAAAATGTATTGAAAGCTCAGAAAGGGGGGAAAACTCAAAACAAACCTTGTTCACAAAAAATAAGAAGAAAAGGAAAAAATAAATCTCAAACACAGTTGACTGATGAGACACCAAGCAGCTATGCTGGTGATGGCCTTACTAGCTCAGATGCACTACACAATATATATCCCACAGCAATTGATGAGATCATTTGTCGACTCCAAGATCTCAACTTTGGGGACAGCAATATATCAAGAGTCGATGGACAAAGTGCAATTGTCCTATATAAGGGAGAAGGTTCAGTTGTCCCATATGAGGGGTTTGACTTCGGAAGAAAACGTAAACCACGGCCCAAAGTGGATCTTGACCCAGAAACAGAGAGAACCTGGAAACTATTAATGGACAAGGGAGTAAGTGAAGGCCTTGAAGGAAATGACAAGGAAAAGGAGAAGTGGTGGGAAGAGCAAAGAGAAGTTTTTCATGGAAGAGTTGATTCCTTCATTGCACGAATGCATCTTGTTCAAGGAGATAGGCGCTTTTCTCAGTGGAAGGGATCAGTAGTGGATTCAGTGATAGGAGTCTTCCTTACTCAGAATGTTTCAGACCATCTTTCAAGCTCAGCCTTCATGTGTCTAGCAGCAAGGTTTCCTCTCCTGTCAGAAAGTGACACAGACAAGAGATCATGCTGTATTGTTGGCATAGACAAATTGGTTGAAAAACCAGAAGTCTGCATGGTAAATCGAGATGACATCATGATATCATCCAACAAAAGATTAAGTCACCCAACCTACCATCAAGGCTTTGTGCCTCCCCATGATACAAGTGAGCGCTGGAGAGACTGTGAGACCGCAAGGACAAAAGTAAGTCTCAACAGTCCATATACTCAGAGCTCAAAGGATGAAATCATATCGTCACAAGATTCTCTTGATCATTCAATTGCTGAAGCCACCAGAGGGATAAGATCCTCCTCAGGTTCCAATTCAGAAGCAGAAGGCCATACAACAGGGTGTGAACCCTGGAAGACTCAACTTTTAAATTCAACAAATTCTGTACATGTACGAAAGGCCACACTATTCCAAGAATTTTACAGTAGTGTAAATGGAGTGTCACTGTTTGATGAGAGAACCAAAGATGGACAGGCTCTACATGAAAAGTATCCCAGACAAAACTCAAGGTCGGGTGAAATTGATGATCTTATTTCACATTCACCATTTAATCATCTGATCAAATTTGGAAATTCACAAAAGCGAGTGCCTGAAGGTTATTCAGCAGACTATGAGTTACATGACTTAGAGGCACTTGGGATGATGAAAACTTCTCAAATGAATGGTACGGAGTCTTCTGGGAGAGAAACTATTTCCCTCATAAACAAGTTACAAGATACTGGCTATAGGACTGTCAGCATCCAGGCTGTAGGAGGAAGTGTAGATAAATTGACTGAGAAGCAATATAGGCCAATTAAGTCACAGGAGTTACCAGCAATTAACCCATATGAACCATTGAGTGTTCATGTTGTCCAACCACAAGATAACTCTCCGTTAGGATCTGATACATATCATCATCAACCTTTATCTGGATATCATCTTGCAGGTTTTCATGCTGATAAAAGAATATCTGAGGTTAATGGACAAGCCTACTCGAATGATAGCAGTGCTGAACTGAAGCCACAGGAGCAACTTTGCCCTTCTGGTACCATGAATATAGGGAGCAAACAGAAAGTTTCAAAATCCAGAAAAATAAAGGTTCAGACTGGGAAGCTGAACAAAGTTGATTGGGATGATTTAAGAAAGAAAGCACAGGTCAATGGGACAAAAAAAGAAAGGAGCAAAGAAACAATGGATTCGCTGGACTACGAGGCACTGAGACGTGCCTCAGTGAAAGAAATCTCTGCAACTATCAGAGAACGAGGAATGAACAATATGCTAGCCGAAAGAATCAAGGAATTTTTGGACAGACTGGTTAGAGAACATGGAAGCATTGATTTGGAATGGTTAAGAGATGTTCCTCCTGATAAAGCAAAAGATTACTTGCTAAGCATACGTGGATTGGGGCTGAAGAGTGTGGAGTGTGTCCGGCTCCTAACACTTCATCATCTTGCTTTCCCAGTTGACACAAATGTTGGAAGGATAGCAGTTAGACTTGGTTGGGTCCCTCTTCAACCACTCCCTGAATCACTTCAGTTACACCTCCTTGAATTGTATCCAGTGTTGGAATCAATTCAGAAGTATCTCTGGCCCAGATTGTGCAAACTTGATCAGAGAACCTTGTATGAGCTTCACTACCAGATGATTACCTTCGGAAAGGTTTTCTGTACAAAGAGTAAACCGAATTGCAATGCATGTCCTTTGCGTGCAGAGTGCAGACACTTTGCAAGTGCTTTTGCAAGTGCCCGGCTTGCATTACCTGGACCAGAAGAGAAAGGAATGGTGAGTAATCCTGTTCCCATTGCAACTGAGAGAAATCCTACTCTCAACATGAATCCAGCGGTACTACCACTCCCTGAAATCAATTTGCTTAGAGAAGCAACTTCTGAAATTTGTAAGTATGAGCCGATCATTGAAGAACCAGAAACACCAGAACAAGAGTGCCCAGACACACAGGCATTGGAAAGTGACATTGAGGATTCATTCTGGGATGATCCTGATGAAATTCCAATGATCAAGCTCAATACTGAAGAGTTTGCAATGAATATACAAAACATATTGCAAGAAAACATGGAGCTTGTAGAAGGTGACTTGTCTAAGGCACTTGTTGCTTTTAATCCAGCTACGGCTTCCATTCCTACACCAAAGCTGAAGAATGTGAGTCGGCTACGGACAGAACACCATGTATATGAGCTTCCAGATTCTCATCCTCTCTTGGAAAAGATGGAGAAGCGTGAACCTGATGACCCAAGCCCATATCTTCTTGCAATTTGGACACCAGGTGAAACTGCAAATTCGATTGAGCAACCAGAGAGAAGATGTAAATCCCAGGATTCAAGCAGCCTATGCAATGACAATACATGCTTCTCATGCAATAGCATTAGAGAAGCTAATTCACAAACAGTCAGAGGAACTCTACTGATTCCTTGTAGAACAGCAACAAGAGGGAGCTTTCCATTGAATGGCACTTACTTCCAAGTTAATGAGGTATTTGCAGACCATGCAACCAGCATTCAACCCATTGCTGTCCCTAGGGAATGGATATGGAATTTGCCAAGGAGGACTGTATATTTTGGAACATCTGTATCAAGCATTTTCAAAGGTCTTTCAACTCAAGGGATTCAACAGTGCTTTTGGAGAGGATTTGTTTGCGTCAGAGGGTTTGACCAAGAAACACGCTTGCCTCGCCCTCTTATCGCCAGATTGCATTTTCCAGCTAGTAGATTAAATAGAGGGGAAAAAGTGAGAACAGGGAGTAACAAGACATGA 5391 0.4166 MMNLGEKIFTLEEEQVQMNGSWVPVTPEKPVQIRSETITAGWQENQMVGGNLKKLTIPGSGYMKEMLQYNGLDQNVHLVGQTEEYNYFDGGSSRAGIINHSDVDFDSNILNTLELLFMKDASNIAHDDRNLSESISMAVRTPVLPKFHPHTISNGRDFNADGFTVKENNNSATVYTDANLLVPNRNSECDSSGLYDFLNHDIHCSFSSLLNSSLSESEIPNGGFYVPCIPSFDQNSASVTEADDVFSLTNSFQSAPETMDQFNQFTESQFVKHVTAESQIQVTDRPDNLVASTENDHREYCDGLLQHIVDTSAAASKSPNKIEGSENDFRSGSGLDIDLNKTPEQKPPKRRKHRPKVIAEGKPKRTPNPATRKKREYMENPPQKRKYVRKNVPKEATSQADVIENLGCGTATRPQKRKYVRKNVPKGATPRADVMENLGSGTAARKSCRKALDFDLEESRCKEQNNIVGRQEIQGRNGLLTEFLSAARVCYDTNSTLLVSNQDGFMIENQQPRSTDDGAFLLHQRLSDRCLPKEQANVPLPANTEMEIKNLLETEKGPAQGNAGFCKERNNGCLEQCIHADGIDNVLLQSEICLEIHQSTKVPMSQNDLQLVPNILSNCIEGSSLKRKYCHADEKQYVSATNPLDSSLLHQEIFQVDENCNGTPLDKNVLKAQKGGKTQNKPCSQKIRRKGKNKSQTQLTDETPSSYAGDGLTSSDALHNIYPTAIDEIICRLQDLNFGDSNISRVDGQSAIVLYKGEGSVVPYEGFDFGRKRKPRPKVDLDPETERTWKLLMDKGVSEGLEGNDKEKEKWWEEQREVFHGRVDSFIARMHLVQGDRRFSQWKGSVVDSVIGVFLTQNVSDHLSSSAFMCLAARFPLLSESDTDKRSCCIVGIDKLVEKPEVCMVNRDDIMISSNKRLSHPTYHQGFVPPHDTSERWRDCETARTKVSLNSPYTQSSKDEIISSQDSLDHSIAEATRGIRSSSGSNSEAEGHTTGCEPWKTQLLNSTNSVHVRKATLFQEFYSSVNGVSLFDERTKDGQALHEKYPRQNSRSGEIDDLISHSPFNHLIKFGNSQKRVPEGYSADYELHDLEALGMMKTSQMNGTESSGRETISLINKLQDTGYRTVSIQAVGGSVDKLTEKQYRPIKSQELPAINPYEPLSVHVVQPQDNSPLGSDTYHHQPLSGYHLAGFHADKRISEVNGQAYSNDSSAELKPQEQLCPSGTMNIGSKQKVSKSRKIKVQTGKLNKVDWDDLRKKAQVNGTKKERSKETMDSLDYEALRRASVKEISATIRERGMNNMLAERIKEFLDRLVREHGSIDLEWLRDVPPDKAKDYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPLRAECRHFASAFASARLALPGPEEKGMVSNPVPIATERNPTLNMNPAVLPLPEINLLREATSEICKYEPIIEEPETPEQECPDTQALESDIEDSFWDDPDEIPMIKLNTEEFAMNIQNILQENMELVEGDLSKALVAFNPATASIPTPKLKNVSRLRTEHHVYELPDSHPLLEKMEKREPDDPSPYLLAIWTPGETANSIEQPERRCKSQDSSSLCNDNTCFSCNSIREANSQTVRGTLLIPCRTATRGSFPLNGTYFQVNEVFADHATSIQPIAVPREWIWNLPRRTVYFGTSVSSIFKGLSTQGIQQCFWRGFVCVRGFDQETRLPRPLIARLHFPASRLNRGEKVRTGSNKT 1796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0240 1796 MobiDBLite consensus disorder prediction 673 709 - -
Prci1g0240 1796 CDD ENDO3c 1278 1394 IPR003265 GO:0006284
Prci1g0240 1796 Gene3D Hypothetical protein; domain 2 1270 1357 - -
Prci1g0240 1796 MobiDBLite consensus disorder prediction 976 999 - -
Prci1g0240 1796 MobiDBLite consensus disorder prediction 312 380 - -
Prci1g0240 1796 Gene3D - 1358 1446 IPR023170 -
Prci1g0240 1796 Pfam Permuted single zf-CXXC unit 1644 1675 IPR028924 -
Prci1g0240 1796 FunFam DNA glycosylase/AP lyase ROS1 1350 1458 - -
Prci1g0240 1796 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 248 1787 IPR044811 GO:0019104|GO:0035514|GO:0080111
Prci1g0240 1796 SMART endo3end 1263 1428 IPR003265 GO:0006284
Prci1g0240 1796 SMART ccc3 1429 1449 IPR003651 GO:0051539
Prci1g0240 1796 MobiDBLite consensus disorder prediction 366 380 - -
Prci1g0240 1796 MobiDBLite consensus disorder prediction 312 327 - -
Prci1g0240 1796 Pfam RRM in Demeter 1678 1778 IPR028925 -
Prci1g0240 1796 SUPERFAMILY DNA-glycosylase 820 1451 IPR011257 GO:0003824|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0240 Prci-Chr1 2234266 2245855 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0240 - - pcin:129312503 3554.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0240 1 2234266 2245855 Prci1g0240 1 2234266 2245855 ECH