Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0207 ATGGGGTGGTGGTGGTGGTGGAGTGGGATGAGAGAGTTAAGGCCGTTGATTCACTTACTATTGCCGTTCTTCATCCATGGCGTCGCCGAAGAAATGCCGATTTCTGTTCTCGTTGATTTCACCACTTCTGCTTTGTGTCCTCCTCACTCTTCCTCTTGCTCCACATCTCTCTTCATCGTCGCTCTTCAACAAACAGTGGTGGGAATTTTCAAGATGGTGGTGCTACCGCTACTGGGTCAGCTTGCTGACGAGTATGGCCGCAAACCCTTGCTCCTCCTTACCTTTTCTGCCTCCATCTTCCCTTTTGCTGTAATATCGTGGAAACAGACAGAGGAACATGTGTATGCCTACTATGTGCTACGCACCGTTTCCTCCATTATCAGTCAAGGCAGCACTTACTGCCTCATGTTTGCTTATGTGGCAGATATTGTAGAAGAGAACAAAAGAGCAGCAGTGTTTGGGTGTATCACTGGTCTTCACTCTGCTTCACAGTTCATAGGTGATGCCTTGGCTCGCTTCCTTCCTGCGCACTACATTTTTGGGGTGTCGACGACGCTGTTGATATTTTGCTCAGCTTACATGCTCGTGTTCCTTTCTGAAACTCTGAAGTTAGCTCCAACCAAGGATCAGCACTCGCATCGCTTCCCTAAGCTCACTCATATTCTCCATCAACGATTCACTTCTATGACCAATGCTGCTCGACTTGTCATTTCCAGTCCGACATTGCGAGGCATAGCTCTTGTCTCTTTCTTCTATGAGTTGGGAATGTCTGGCACAGTCACCATCTTGCTCTACTATCTGAAAGCAGTTTTCGGCTTTGACAAGAATCAGTTTTCAGAAATTCAAATGTTGGTGGGGATTGGTTCAATCTTTTCCCAGATGGTGTTGGCTCCACTGATTAATCCAATGGTTGGAGAGAAAGTGATACTCTGCTTTGCATTGCTTGCATCCATAGCATATGCATTGCTCTATGGACTGGCATGGGCTCCTTGGGTGGCGTACTTGAGTGCATCTCTTGGTGTCTTCTATGTCCTGGTGAAACCTTTTACTTATGCTATTATTTCAAAAGCATCAAGCTCAGCTAATCAGGGAAAATCACAAGGCTTCATTGCTGGGGTCCAATCTATTGCTCATTTGTTATCTCCTATGATCATGAGTTCATTGACGTCGTGGTTTTTATCTAGCAGTGCTCCTTTTCAATGCAAAGGCTTTAGCTTAATATGTGCTTCCATTATCATGATGATTTCTCTCTGTTTTGCTTGCTTATTGGAGCCTCGATCTCATTCAATTGATGATGTCGAAGTCGATCTTGAAACTCCTTTACTTAATTAA 1332 0.4489 MGWWWWWSGMRELRPLIHLLLPFFIHGVAEEMPISVLVDFTTSALCPPHSSSCSTSLFIVALQQTVVGIFKMVVLPLLGQLADEYGRKPLLLLTFSASIFPFAVISWKQTEEHVYAYYVLRTVSSIISQGSTYCLMFAYVADIVEENKRAAVFGCITGLHSASQFIGDALARFLPAHYIFGVSTTLLIFCSAYMLVFLSETLKLAPTKDQHSHRFPKLTHILHQRFTSMTNAARLVISSPTLRGIALVSFFYELGMSGTVTILLYYLKAVFGFDKNQFSEIQMLVGIGSIFSQMVLAPLINPMVGEKVILCFALLASIAYALLYGLAWAPWVAYLSASLGVFYVLVKPFTYAIISKASSSANQGKSQGFIAGVQSIAHLLSPMIMSSLTSWFLSSSAPFQCKGFSLICASIIMMISLCFACLLEPRSHSIDDVEVDLETPLLN 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0207 443 CDD MFS_SLC46_TetA_like 19 422 - -
Prci1g0207 443 ProSiteProfiles Major facilitator superfamily (MFS) profile. 19 428 IPR020846 GO:0022857
Prci1g0207 443 Pfam Major Facilitator Superfamily 55 382 IPR011701 GO:0022857|GO:0055085
Prci1g0207 443 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 18 416 - -
Prci1g0207 443 Gene3D MFS general substrate transporter like domains 11 423 IPR036259 -
Prci1g0207 443 ProSitePatterns Sugar transport proteins signature 1. 78 94 IPR005829 GO:0016020|GO:0022857|GO:0055085
Prci1g0207 443 SUPERFAMILY MFS general substrate transporter 38 425 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0207 Prci-Chr1 1922504 1929137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0207 8 404 Organic Solute Cotransporters AT2G16990 29.904 4.04e-57 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0207 - - vun:114191397 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0207 1 1922504 1929137 Prci1g0207 1 1922504 1929137 ECH