Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g1027 ATGAAGCATACCTCGTCTGAGGCAGCTCCGTCTTTATCTTCAGCACCCTCTTCAACAGACCAATCACAATTTACCACTTCATCGTCGTCGTTGGCTTCGCCGGACAAACCCGTTTTTGGTTCGTCCGCGCCTGCTCTGGAGGACTTGGCTGTCGGGTCAAGGGATGGAAGCGGCGCCCAGGAGTCCGTGACCGTCGAACGCCGGGGCGACTACTCGGCCGTTTGCCGCTGGACGGTTCATAATTTTCCGCGAATAAAAGCTAGGGCACTATGGAGCAAGTACTTCGAGGTTGGAGGTTATGATTGCCGTCTCTTGATATACCCCAAGGGTGACTCTCAGGCCTTGCCAGGCTATATCTCCATATACCTCCAAATCATGGACCCTCGGGGCACTTCCTCGTCCAAATGGGACTGTTTTGCTAGTTACCGGCTGGCAATCGTGAACGTGGCCGACGATTCTAAGATCATTCATCGGGATTCGTGGCATCGGTTCTCGAGTAAGAAGAAATCACACGGGTGGTGTGATTTCACGCCTTCTTCAACAGTATTGGATCCAAAATTGGGCTATCTGTTTAATGGGGATTCGGTATTGATAACCGCTGACATTCTTATTCTTAATGAGTCTATTAATTTTACTCGAGACAACAATGAGCTGCAATCATCGGCATCTTCTTCTTCATCCATGATATCTTCCTCTGTTGTCGCTGGCCCTGTCTCCGACGTGTTGAGTGGAAAATTCACTTGGAAAGTGCATAATTTCAGTTTATTCAAGGAGATGATAAAAACACAGAAGATAATGAGCCCCGTCTTTCCAGCTGGCGAGTGTAATTTGAGGATCAGTGTCTATCAGAGCTCGGTTAATGGGGTTGAATATCTGTCAATGTGCTTGGAAAGCAAGGATACAGACAAAACAGTGATGTTGTCTGATAAGAGTTGCTGGTGTTTATTTCGAATGTCAGTCTTGAACCAGAGGCCAGGTTCGAATCACATGCATAGGGATTCTTATGGGCGGTTTGCGGCTGATAATAAAAGTGGTGATAATACGAGCTTGGGATGGAATGATTATATGAAGATGTCAGATTTTATTGGGCCTGATTCAGGGTTTCTGGTGGATGACACTGCAGTTTTTAGTACCTCGTTTCATGTGATTAAAGAGTTTAGTAGCTTCTCCAAGAATGGGGCTTTAATTGCAGGAAGAAGTGGGAGTGGCGCGAGGAAATCAGATGGTCATATGGGTAAGTTTACTTGGAGGATTGAAAACTTCACAAGGTTAAAGGATTTATTGAAGAAGAGAAAAATCACGGGTCTTTGTATCAAGAGCCGGAGGTTTCAAATTGGTAATCGGGATTGCCGTCTCATTGTATATCCCCGAGGGCAGTCTCAGCCTCCATGCCATCTTTCAGTGTTTCTTGAAGTTACAGATTCAAGAAATAGTTCTAGTGATTGGAGTTGTTTTGTCAGTCATCGGTTGTCAGTTGTGAACCAGAAGATGGAGGAGAAGTCTGTCAGCAAGGAATCTCAGAACCGCTACTCCAAGGCTGCCAAGGATTGGGGCTGGCGTGAATTTGTGACCCTTACCAGTCTCTTTGATCAAGATTCTGGTTTTCTTGTCCAGGATACTGTTGTGTTCTCAGCGGAAGTTCTTATATTGAAAGAGACATCAATAATGCAGGATTTGATTGATTACGATTCTGAGTTGAGTAGTAGTGGTTCCCTTCCTGATAGGTATGTAAAGAGAAGGACATTTACATGGAAAGTGGAGAATTTCCTATCTTTTAAGGAAATAATGGAGACTCGAAAGATCTTCAGTAAATTTTTTCAGGCTGGTGGATGTGAACTTCGGATTGGTGTGTATGAGTCCTTTGATACCATATGTATTTATCTAGAAAGCGACCAGGCTGTAGGTAGTGATCCAGATAAAAACTTTTGGGTTAAATACAGGATGGCTGTTGTGAATCAAAAGAATCCAGCCAAGACAGTGTGGAAGGAATCCTCTATATGTACGAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCTGATATATTGGAAGCAGATGCGGGATTTCTTGTTCGTGATACTGTTGTTTTTGTCTGTGAAATATTGGATTGCTGCCCTTGGTTCGAGTTTTCAGACTTAGAGGTTTTAGCTTCAGATGATGATCAGGATGCTTTGACAACTGATCCTGATGAACTTGTTGACTCTGAAGACAGTGAAGGAATAAGTGGCGATGAAGAAGACATTTTCAGAAATCTTCTTTCTCGAGCTGGATTTCACCTAACATATGGAGATAATCCTTTGCAACCACAAGTTACTTTAAGAGAAAAGCTTTTAATGGATGCTGGTGCAATTGCTGGGTTTCTGACTGGACTGCGGGTTTACCTTGATGATCCTGTGAAAGTAAAGCGTTTGCTTCTTCCAACCAAGCTCTCTGGTAGCTGTGATGGGAAGAAGGTTGCTAAGGCTGATGAATCTTCCCCTAGTTTGATGAATTTGCTGATGGGAGTTAAGGTCTTGCAGCAGGCAATCATTGATTTACTTTTGGATATAATGGTGGAATGCTGCCAGCCTTCTGAAGGGTCCTGTGCTGCTGATTCTCCTGATGCATGCTTGAAAACATCTCGTGATTGCAGTGGAGCTGCTAGTCCTCTTGATTGTGATAGAGAAAATGGGGCAGCGGAATCTGCTCAATTTCCTGTTTATGAGAGATTGGATTCTGCAGATGAAGAAAGTAGTAGTGCATCTGCTGTACACAGCTCTGATTCAAACGGCAGTGTTATTGAGGCGAAAGCTCTTCCTGGAAAACCTATTTTTCCACCAGAAACATCTGCTGTTGTTTCAGAAAATCCATCCTTTCGATCAAAGACCAAGTGGCCAGAACAGTCCGAGGAGCTCTTAGGTTTAATTGTAAACTCACTAAGAACCCTTGATGGGGCTGTTCCACAAGGCTGTCCTGAGCCACGACGGCGTCCTCAGTCTGCACGCAAAATTTCTATTGTGTTGGACAAAGCTCCTAAGCATCTGCAAGCTGACCTTTTAGCACTGGTTCCAAAATTGGTCGACCCTTCAGAACATCCACTAGCTGCCTGTGCACTTCTTGAGCGACTTCAGAAGCCTGATGCAGAACCTTCCTTTCGAATGCGTGTTTTTGAGGCTCTTAGTCAACTGGAGTGTGGTAGTGAAGTGTGGGAACGTGTTCTGTGCCAATCATTTGAGCTTTTGGCTGACTCAAATGGTGAACCCCTTGCTGCAACTATAGATTTTATATTCAAAGCAGCATCTCAATGTCAACATCTTCCTGAAGCAGTTAGATCTGTTCGTGGAAGACTCAAAAATCTAGGTCTTCAGGTTTCACCTTGTGTCCTTGACTTTTTGAGCAAGACTATTAATAGTTGGGAGGATGTTGCGGAAACTATGCTGAGGGACATTGATTGTGATGATGACTTGGGTGACAGTTGCTCAGCACTGTCATGTGGACTTTTCTTATTTGGTGAACATGGCACTGCTCCCACTGGATTGAATGTGGTTGATGAACAGGCTTTCCGAGCTAGTTGTTATTTTTCTGATATTTACATGCTGATCGAGATGCTATCAATTCCGTGTCTTGCTGTTGAAGCTTCTCAAACCTTTGATAGAGCTGTAGCTCGAGGAGCAATTGGTGCTCAGTCTGTAGCCTTGGTCTTGGAGAAGCGTGCCTCCCAGAGATTGACTAATAATGCCAGAAATGCTGCAGAAAGTTTTCCATGTTCAGATGTTGCGGAGGAAAATGCCAATGAACCCTTCGGAGTTCAAAGAGATGATTTTACTTCAGTTCTTGGTCTTGCTGAAACATTAGCACTGTCCAGAGACCCGTGCGTGAAAGAATTTGTGAAGTTACTTTATATGATATTGTTCAGATGGTATGCTGATGAATCTTATAGAGGGACAATGCTCAAGAGGCTTGTTGACCGTGCCACCAGCACTACAGATAATGGACATGAAGTAGACTTAGATTTGGATATTTTAGTTACTTTGATCTGTGAAGAGCAGGAAATTGCTAGACCTGTTTTGAGTATGATGCGGGAAGTTGCTGAACTTGCAAATGTCGATCGGTCTGCTCTGTGGCACCAGTTATGTGCCAGTGAAGATGAAATCATTCGTCTTCGTGAAGAAAAGAAAGCTGAGATTTCCAATATGGCTAAGGAAAAAGCTATTCTTGCCCAAAAACTGAGTGAATCTGAGGCCACAAGTATTCGTCTCAAGTCTGAAATGAGGGCTGAGATGGATCGGTTGGCTCGGGAGAAGAAGGAGCTAGTTGAACAAATACAAGAAGTTGAAAGTCAGCTTGAGTGGCATCGTTCGGAGCGGGATGATGAAATAGCAAAGCTCTCTGCAGAGAAAAAAGCTCTTCAGGACCGTGTGCATGATGCAGAGGCACAACTGTCACAATTGAAGTCTCGAAAACGTGATGAATTGAAGAAAGTAGTCAAGGAAAAAAATGCACTTGCTGAAAGATTGAAGAGTGCTGATGCTGCACGGAAGAGATTTGATGAAGAACTGAAAAGATATGCAACAGAAAATGTCACTCGGGAAGAAATACGAAAATCGCTTGAGGATGAAGTCCGTAGATTGACTCAAACGGTTGGACAAACTGAGGAAGAAAAGAGAGAGAAGGAAGAGCAGGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAATTGCAGGCCTGCCAGCAATATATTCACACGCTGGAAGCTTCACTTCAGGAGGAAATGTCACGTCATGCTCCTCTCTACGGTGCTGGTCTGGAGGCTCTATCAATGAAAGAGTTGGAAACACTGTCACGTATCCACGAGGAAGGGCTGAGGCAGATCCATGCCCTTCAACAGCGTAAAGGGAGTCCAGGTGGCAGTCCTCTTGTGAGTCCACACGCCCTTCCACACAATCCTGGATTATATCCCTCTGCCTCCCTTCCATTGCCCGTGGGGCTCCCTCTTTCCCTCATTCCAAATGGGGTAAGCATCCACGGCAATGGCCACGTCAATGGTGCAGTGGGGCCCTGGTTTAAGCACACTTGA 5070 0.4444 MKHTSSEAAPSLSSAPSSTDQSQFTTSSSSLASPDKPVFGSSAPALEDLAVGSRDGSGAQESVTVERRGDYSAVCRWTVHNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNVADDSKIIHRDSWHRFSSKKKSHGWCDFTPSSTVLDPKLGYLFNGDSVLITADILILNESINFTRDNNELQSSASSSSSMISSSVVAGPVSDVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKTVMLSDKSCWCLFRMSVLNQRPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGPDSGFLVDDTAVFSTSFHVIKEFSSFSKNGALIAGRSGSGARKSDGHMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNSSSDWSCFVSHRLSVVNQKMEEKSVSKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSIMQDLIDYDSELSSSGSLPDRYVKRRTFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVKYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDILEADAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASDDDQDALTTDPDELVDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNPLQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPVKVKRLLLPTKLSGSCDGKKVAKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEGSCAADSPDACLKTSRDCSGAASPLDCDRENGAAESAQFPVYERLDSADEESSSASAVHSSDSNGSVIEAKALPGKPIFPPETSAVVSENPSFRSKTKWPEQSEELLGLIVNSLRTLDGAVPQGCPEPRRRPQSARKISIVLDKAPKHLQADLLALVPKLVDPSEHPLAACALLERLQKPDAEPSFRMRVFEALSQLECGSEVWERVLCQSFELLADSNGEPLAATIDFIFKAASQCQHLPEAVRSVRGRLKNLGLQVSPCVLDFLSKTINSWEDVAETMLRDIDCDDDLGDSCSALSCGLFLFGEHGTAPTGLNVVDEQAFRASCYFSDIYMLIEMLSIPCLAVEASQTFDRAVARGAIGAQSVALVLEKRASQRLTNNARNAAESFPCSDVAEENANEPFGVQRDDFTSVLGLAETLALSRDPCVKEFVKLLYMILFRWYADESYRGTMLKRLVDRATSTTDNGHEVDLDLDILVTLICEEQEIARPVLSMMREVAELANVDRSALWHQLCASEDEIIRLREEKKAEISNMAKEKAILAQKLSESEATSIRLKSEMRAEMDRLAREKKELVEQIQEVESQLEWHRSERDDEIAKLSAEKKALQDRVHDAEAQLSQLKSRKRDELKKVVKEKNALAERLKSADAARKRFDEELKRYATENVTREEIRKSLEDEVRRLTQTVGQTEEEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSMKELETLSRIHEEGLRQIHALQQRKGSPGGSPLVSPHALPHNPGLYPSASLPLPVGLPLSLIPNGVSIHGNGHVNGAVGPWFKHT 1689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g1027 1689 Coils Coil 1384 1404 - -
Prci15g1027 1689 CDD MATH 244 376 IPR002083 GO:0005515
Prci15g1027 1689 MobiDBLite consensus disorder prediction 1 42 - -
Prci15g1027 1689 SUPERFAMILY TRAF domain-like 580 704 - -
Prci15g1027 1689 Gene3D - 1445 1639 - -
Prci15g1027 1689 ProSiteProfiles MATH/TRAF domain profile. 579 703 IPR002083 GO:0005515
Prci15g1027 1689 PANTHER TRAF-LIKE FAMILY PROTEIN 25 1689 - -
Prci15g1027 1689 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 58 208 IPR008974 GO:0005515
Prci15g1027 1689 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 239 386 IPR008974 GO:0005515
Prci15g1027 1689 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 402 556 IPR008974 GO:0005515
Prci15g1027 1689 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 571 705 IPR008974 GO:0005515
Prci15g1027 1689 ProSiteProfiles MATH/TRAF domain profile. 72 202 IPR002083 GO:0005515
Prci15g1027 1689 SUPERFAMILY TRAF domain-like 412 553 - -
Prci15g1027 1689 CDD MATH 581 703 IPR002083 GO:0005515
Prci15g1027 1689 CDD MATH 412 547 IPR002083 GO:0005515
Prci15g1027 1689 ProSiteProfiles MATH/TRAF domain profile. 243 380 IPR002083 GO:0005515
Prci15g1027 1689 ProSiteProfiles MATH/TRAF domain profile. 411 547 IPR002083 GO:0005515
Prci15g1027 1689 MobiDBLite consensus disorder prediction 1 36 - -
Prci15g1027 1689 SUPERFAMILY TRAF domain-like 241 386 - -
Prci15g1027 1689 Coils Coil 1416 1521 - -
Prci15g1027 1689 SUPERFAMILY TRAF domain-like 72 209 - -
Prci15g1027 1689 CDD MATH 76 202 IPR002083 GO:0005515
Prci15g1027 1689 Coils Coil 1529 1563 - -
Prci15g1027 1689 Pfam MATH domain 81 203 IPR002083 GO:0005515
Prci15g1027 1689 Pfam MATH domain 592 699 IPR002083 GO:0005515
Prci15g1027 1689 Pfam MATH domain 443 549 IPR002083 GO:0005515
Prci15g1027 1689 SMART math_3 74 182 IPR002083 GO:0005515
Prci15g1027 1689 SMART math_3 248 361 IPR002083 GO:0005515
Prci15g1027 1689 SMART math_3 584 684 IPR002083 GO:0005515
Prci15g1027 1689 SMART math_3 416 528 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g1027 Prci-Chr15 6373177 6382678 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g1027 - - ccaj:109798115 2823.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g1027 15 6373177 6382678 Prci15g1027 15 6373177 6382678 ECH