Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g1025 ATGGCTGCTTCCACCAAGCTCTGTGCCACCGTGCTGGTGTTCTATCTCCTTGCCTTCCCAACCTCCACCGAAGCTTGTGGGTCATGCAAGCCTCCCAAGCCCAAGCCCTGTCCGACTCCAGCGCCGGCCAAGTGCCCGACGGACGCGCTGAAGCTAGCGGCGTGTGCTGACGTTCTGGGCCTTGTAAACGTCGTCGTTGGGTCTGCTCCTACCAGCAAGTGTTGCCCGTTGCTGGAAGGTTTGGTAGATTTGGAGGCTGCGCTCTGCCTCTGTACTGCCATTAAGGCCAACGTGCTTGGCATCAACTTGAACGTACCCCTCAGCCTCAGCTTGATTCTTAGCTCGTGTCAAAAATCTGTTCCTACTGGTTTCCAATGTCCCTAG 384 0.5677 MAASTKLCATVLVFYLLAFPTSTEACGSCKPPKPKPCPTPAPAKCPTDALKLAACADVLGLVNVVVGSAPTSKCCPLLEGLVDLEAALCLCTAIKANVLGINLNVPLSLSLILSSCQKSVPTGFQCP 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g1025 127 PANTHER - 8 126 - -
Prci15g1025 127 SMART aai_6 45 126 IPR016140 -
Prci15g1025 127 CDD HPS_like 44 126 IPR027923 -
Prci15g1025 127 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 48 127 IPR036312 -
Prci15g1025 127 FunFam pEARLI1-like lipid transfer protein 1 43 127 - -
Prci15g1025 127 Gene3D - 42 127 IPR036312 -
Prci15g1025 127 Pfam Hydrophobic seed protein 45 127 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g1025 Prci-Chr15 6360855 6361648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g1025 36 127 Acyl Lipid Metabolism Gene Families AT4G22490 36.957 5.11e-15 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g1025 - - qsa:O6P43_015707 164.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g1025 15 6360855 6361648 Prci15g1025 15 6360855 6361648 ECH